DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LQAPRGPR
Uniprot ID:
Q9Y5Y9
Source protein:
Sodium channel protein type 10 subunit alpha
Source gene:
SCN10A
Class:
SCF_FBXL2
Location:
974:981
E3 ligase:
FBXL2
DEGRON score:
0.9986
ASA_SCORE:
77.7625
COIL:
0.8294
CONS_SCORE:
0.2997
DSS_SCORE:
0.6745
HELIX:
0.0498
FCONS_SCORE:
1.2768
RIG_SCORE:
0.5929
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S985N
TCGA-AP-A0LM
UCEC
TCGA
LQAPRGPR
SCF_FBXL2
0.2222
p.S985N
DO43306
UCEC
ICGC
LQAPRGPR
SCF_FBXL2
0.2222
p.P977S
TCGA-AX-A2HC
UCEC
TCGA
LQAPRGPR
SCF_FBXL2
0.5641
p.P977S
DO222875
MELA
ICGC
LQAPRGPR
SCF_FBXL2
0.5641
p.P977S
DO219878
SKCA
ICGC
LQAPRGPR
SCF_FBXL2
0.5641
p.P977S
DO41572
UCEC
ICGC
LQAPRGPR
SCF_FBXL2
0.5641
p.A989T
TCGA-BR-8591
STAD
TCGA
LQAPRGPR
SCF_FBXL2
0.1111
p.A989T
TCGA-EO-A22R
UCEC
TCGA
LQAPRGPR
SCF_FBXL2
0.1111
p.A989T
DO47973
STAD
ICGC
LQAPRGPR
SCF_FBXL2
0.1111
p.A989T
DO42713
UCEC
ICGC
LQAPRGPR
SCF_FBXL2
0.1111
p.R981K
TCGA-EE-A2GO
SKCM
TCGA
LQAPRGPR
SCF_FBXL2
0.7237
p.R981K
DO37823
SKCM
ICGC
LQAPRGPR
SCF_FBXL2
0.7237
p.S970I
TCGA-VQ-A8DT
STAD
TCGA
LQAPRGPR
SCF_FBXL2
0.2222
p.S970I
DO51751
STAD
ICGC
LQAPRGPR
SCF_FBXL2
0.2222
p.R978K
DO225367
BRCA
ICGC
LQAPRGPR
SCF_FBXL2
0.7237
p.R968G
DO233784
GACA
ICGC
LQAPRGPR
SCF_FBXL2
0.1667
p.L974I
DO230525
LUSC
ICGC
LQAPRGPR
SCF_FBXL2
0.6063
p.P991L
SIDM00389
B-Cell Non-Hodgkin's Lymphoma
GDSC
LQAPRGPR
SCF_FBXL2
0.0556
p.P991L
SIDM00883
Non-Cancerous
GDSC
LQAPRGPR
SCF_FBXL2
0.0556
p.P991S
SIDM00516
Melanoma
GDSC
LQAPRGPR
SCF_FBXL2
0.0556
p.P991S
ACH-002166
Skin Cancer
CCLE
LQAPRGPR
SCF_FBXL2
0.0556
p.P991S
MZ7-mel
skin
COSMIC
LQAPRGPR
SCF_FBXL2
0.0556
p.F987V
ACH-001111
Lymphoma
CCLE
LQAPRGPR
SCF_FBXL2
0.1667
Drug responses associated with SCN10A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQAPRGPR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5Y9
Sodium channel protein type 10 subunit alpha
SCF_FBXL2
974:981
LQAPRGPR
FBXL2
0.9986
More...