DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQGPRGLR
Uniprot ID:
Q14050
Source protein:
Collagen alpha-3
Source gene:
COL9A3
Class:
SCF_FBXL2
Location:
227:234
E3 ligase:
FBXL2
DEGRON score:
0.6359
ASA_SCORE:
90.225
COIL:
0.9334
CONS_SCORE:
0.7935
DSS_SCORE:
0.7294
HELIX:
0.0212
FCONS_SCORE:
1.0213
RIG_SCORE:
0.6092
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R231W
TCGA-2W-A8YY
CESC
TCGA
LQGPRGLR
SCF_FBXL2
0.8634
p.R231W
DO223732
CESC
ICGC
LQGPRGLR
SCF_FBXL2
0.8634
p.R231W
DO233805
GACA
ICGC
LQGPRGLR
SCF_FBXL2
0.8634
p.R231Q
TCGA-A5-A0VP
UCEC
TCGA
LQGPRGLR
SCF_FBXL2
0.7329
p.R231Q
DO42600
UCEC
ICGC
LQGPRGLR
SCF_FBXL2
0.7329
p.P242H
DO234253
ESAD
ICGC
LQGPRGLR
SCF_FBXL2
0.1111
p.G223V
DO228978
LICA
ICGC
LQGPRGLR
SCF_FBXL2
0.2222
p.G217W
DO228986
LICA
ICGC
LQGPRGLR
SCF_FBXL2
0.0556
p.G223S
DO220859
MELA
ICGC
LQGPRGLR
SCF_FBXL2
0.2222
p.G232R
DO219871
SKCA
ICGC
LQGPRGLR
SCF_FBXL2
0.7568
p.G241W
DO229248
THCA
ICGC
LQGPRGLR
SCF_FBXL2
0.1389
p.G241R
SIDM01302
Esophageal Carcinoma
GDSC
LQGPRGLR
SCF_FBXL2
0.1389
p.G241R
SIDM00487
Colorectal Carcinoma
GDSC
LQGPRGLR
SCF_FBXL2
0.1389
p.G241R
ACH-000963
Colon/Colorectal Cancer
CCLE
LQGPRGLR
SCF_FBXL2
0.1389
p.R234P
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
LQGPRGLR
SCF_FBXL2
0.7512
Drug responses associated with COL9A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQGPRGLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14050
Collagen alpha-3
SCF_FBXL2
227:234
LQGPRGLR
FBXL2
0.6359
More...