DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQLRGR
Uniprot ID:
Q9Y5H2
Source protein:
Protocadherin gamma-A11
Source gene:
PCDHGA11
Class:
SCF_FBXL2
Location:
181:186
E3 ligase:
FBXL2
DEGRON score:
0.8001
ASA_SCORE:
55.0333
COIL:
0.2267
CONS_SCORE:
0.516
DSS_SCORE:
0.4721
HELIX:
0.002
FCONS_SCORE:
0.9971
RIG_SCORE:
0.7395
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S180C
TCGA-22-1005
LUSC
TCGA
LQLRGR
SCF_FBXL2
0.3056
p.S180C
DO26632
LUSC
ICGC
LQLRGR
SCF_FBXL2
0.3056
p.R186K
TCGA-64-1677
LUAD
TCGA
LQLRGR
SCF_FBXL2
0.7237
p.R186K
DO23996
LUAD
ICGC
LQLRGR
SCF_FBXL2
0.7237
p.R186K
DO49463
PACA
ICGC
LQLRGR
SCF_FBXL2
0.7237
p.T187M
TCGA-AA-3864
COAD
TCGA
LQLRGR
SCF_FBXL2
0.3056
p.T187M
TCGA-LI-A67I
SARC
TCGA
LQLRGR
SCF_FBXL2
0.3056
p.T187M
DO8490
COAD
ICGC
LQLRGR
SCF_FBXL2
0.3056
p.T187M
DO220201
SARC
ICGC
LQLRGR
SCF_FBXL2
0.3056
p.A190V
TCGA-BR-4257
STAD
TCGA
LQLRGR
SCF_FBXL2
0.2222
p.A190V
DO38683
STAD
ICGC
LQLRGR
SCF_FBXL2
0.2222
p.R184Q
TCGA-DA-A1IC
SKCM
TCGA
LQLRGR
SCF_FBXL2
0.7329
p.R184Q
DO37430
SKCM
ICGC
LQLRGR
SCF_FBXL2
0.7329
p.N176I
TCGA-EO-A3KX
UCEC
TCGA
LQLRGR
SCF_FBXL2
0.1944
p.N176I
DO219774
UCEC
ICGC
LQLRGR
SCF_FBXL2
0.1944
p.P193S
TCGA-FS-A1ZD
SKCM
TCGA
LQLRGR
SCF_FBXL2
0.1389
p.P193S
DO37627
SKCM
ICGC
LQLRGR
SCF_FBXL2
0.1389
p.Q172R
DO228947
LICA
ICGC
LQLRGR
SCF_FBXL2
0.0833
p.S180F
DO232224
PBCA
ICGC
LQLRGR
SCF_FBXL2
0.3056
p.G185D
SIDM02059
Colorectal Carcinoma
GDSC
LQLRGR
SCF_FBXL2
0.7198
p.G185D
SIDM01278
Colorectal Carcinoma
GDSC
LQLRGR
SCF_FBXL2
0.7198
p.G185D
ACH-001061
Colon/Colorectal Cancer
CCLE
LQLRGR
SCF_FBXL2
0.7198
p.R186I
SIDM00837
Colorectal Carcinoma
GDSC
LQLRGR
SCF_FBXL2
0.8102
p.R186I
ACH-000958
Colon/Colorectal Cancer
CCLE
LQLRGR
SCF_FBXL2
0.8102
p.R186I
SW48
large_intestine
COSMIC
LQLRGR
SCF_FBXL2
0.8102
Drug responses associated with PCDHGA11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQLRGR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5H2
Protocadherin gamma-A11
SCF_FBXL2
181:186
LQLRGR
FBXL2
0.8001
More...