DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LQPERRGPPR
Uniprot ID:
Q96QH2
Source protein:
PML-RARA-regulated adapter molecule 1
Source gene:
PRAM1
Class:
SCF_FBXL2
Location:
346:355
E3 ligase:
FBXL2
DEGRON score:
0.9984
ASA_SCORE:
109.62
COIL:
0.9706
CONS_SCORE:
0.4653
DSS_SCORE:
0.7741
HELIX:
0.0149
FCONS_SCORE:
1.3536
RIG_SCORE:
0.5929
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q359H
TCGA-AX-A2HD
UCEC
TCGA
LQPERRGPPR
SCF_FBXL2
0.2222
p.Q359H
DO42608
UCEC
ICGC
LQPERRGPPR
SCF_FBXL2
0.2222
p.R350C
TCGA-FI-A2D5
UCEC
TCGA
LQPERRGPPR
SCF_FBXL2
0.719
p.R350C
TCGA-L5-A43J
ESCA
TCGA
LQPERRGPPR
SCF_FBXL2
0.719
p.R350C
TCGA-Z7-A8R6
BRCA
TCGA
LQPERRGPPR
SCF_FBXL2
0.719
p.R350C
DO51231
BRCA
ICGC
LQPERRGPPR
SCF_FBXL2
0.719
p.R350C
DO41331
UCEC
ICGC
LQPERRGPPR
SCF_FBXL2
0.719
p.L341P
TCGA-G3-A25W
LIHC
TCGA
LQPERRGPPR
SCF_FBXL2
0.1944
p.L341P
DO22970
LIHC
ICGC
LQPERRGPPR
SCF_FBXL2
0.1944
p.A364T
TCGA-G4-6309
COAD
TCGA
LQPERRGPPR
SCF_FBXL2
0.0833
p.A364T
DO7810
COAD
ICGC
LQPERRGPPR
SCF_FBXL2
0.0833
p.A364T
ACH-000930
Breast Cancer
CCLE
LQPERRGPPR
SCF_FBXL2
0.0833
p.E337K
DO222769
COCA
ICGC
LQPERRGPPR
SCF_FBXL2
0.0833
p.R351Q
DO233884
GACA
ICGC
LQPERRGPPR
SCF_FBXL2
0.7329
p.Q359K
DO228952
LICA
ICGC
LQPERRGPPR
SCF_FBXL2
0.2222
p.R350S
SIDM00484
Thyroid Gland Carcinoma
GDSC
LQPERRGPPR
SCF_FBXL2
0.6316
p.P336R
SIDM00517
Head and Neck Carcinoma
GDSC
LQPERRGPPR
SCF_FBXL2
0.0556
p.P336R
ACH-002239
Head and Neck Cancer
CCLE
LQPERRGPPR
SCF_FBXL2
0.0556
p.P336R
H3118
upper_aerodigestive_tract
COSMIC
LQPERRGPPR
SCF_FBXL2
0.0556
p.S363R
SIDM01182
Bladder Carcinoma
GDSC
LQPERRGPPR
SCF_FBXL2
0.1111
Drug responses associated with PRAM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQPERRGPPR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96QH2
PML-RARA-regulated adapter molecule 1
SCF_FBXL2
346:355
LQPERRGPPR
FBXL2
0.9984
More...