DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LQPGRGCR
Uniprot ID:
Q9Y6N6
Source protein:
Laminin subunit gamma-3
Source gene:
LAMC3
Class:
SCF_FBXL2
Location:
908:915
E3 ligase:
FBXL2
DEGRON score:
0.6208
ASA_SCORE:
77.625
COIL:
0.8239
CONS_SCORE:
0.7659
DSS_SCORE:
0.0071
HELIX:
0.0188
FCONS_SCORE:
1.0009
RIG_SCORE:
0.7252
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P903L
TCGA-56-7730
LUSC
TCGA
LQPGRGCR
SCF_FBXL2
0.1944
p.P903L
DO26617
LUSC
ICGC
LQPGRGCR
SCF_FBXL2
0.1944
p.R900H
TCGA-A5-A0G1
UCEC
TCGA
LQPGRGCR
SCF_FBXL2
0.1111
p.R900H
DO42472
UCEC
ICGC
LQPGRGCR
SCF_FBXL2
0.1111
p.R915W
TCGA-AA-3672
COAD
TCGA
LQPGRGCR
SCF_FBXL2
0.8634
p.R915W
DO9010
COAD
ICGC
LQPGRGCR
SCF_FBXL2
0.8634
p.G913S
TCGA-EE-A29T
SKCM
TCGA
LQPGRGCR
SCF_FBXL2
0.6993
p.G913S
DO37742
SKCM
ICGC
LQPGRGCR
SCF_FBXL2
0.6993
p.P903H
TCGA-FS-A1ZZ
SKCM
TCGA
LQPGRGCR
SCF_FBXL2
0.1944
p.P903H
DO37412
SKCM
ICGC
LQPGRGCR
SCF_FBXL2
0.1944
p.P921Q
DO224914
BRCA
ICGC
LQPGRGCR
SCF_FBXL2
0.1667
p.R912T
SIDM00775
Non-Small Cell Lung Carcinoma
GDSC
LQPGRGCR
SCF_FBXL2
0.7876
p.R912T
ACH-000785
Lung Cancer
CCLE
LQPGRGCR
SCF_FBXL2
0.7876
p.R912T
NCI-H2126
lung
COSMIC
LQPGRGCR
SCF_FBXL2
0.7876
Drug responses associated with LAMC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQPGRGCR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6N6
Laminin subunit gamma-3
SCF_FBXL2
908:915
LQPGRGCR
FBXL2
0.6208
More...