DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LQPRGDGPR
Uniprot ID:
Q8WWR8
Source protein:
Sialidase-4
Source gene:
NEU4
Class:
SCF_FBXL2
Location:
337:345
E3 ligase:
FBXL2
DEGRON score:
0.989
ASA_SCORE:
51.1667
COIL:
0.697
CONS_SCORE:
0.3361
DSS_SCORE:
0.8641
HELIX:
0.0361
FCONS_SCORE:
1.0497
RIG_SCORE:
0.5616
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P330L
TCGA-05-4382
LUAD
TCGA
LQPRGDGPR
SCF_FBXL2
0.1389
p.P330L
DO24900
LUAD
ICGC
LQPRGDGPR
SCF_FBXL2
0.1389
p.P343H
TCGA-05-4420
LUAD
TCGA
LQPRGDGPR
SCF_FBXL2
0.7694
p.P343S
TCGA-56-7731
LUSC
TCGA
LQPRGDGPR
SCF_FBXL2
0.6752
p.Q351K
TCGA-99-8028
LUAD
TCGA
LQPRGDGPR
SCF_FBXL2
0.1667
p.Q351K
DO23561
LUAD
ICGC
LQPRGDGPR
SCF_FBXL2
0.1667
p.E328K
TCGA-EB-A44O
SKCM
TCGA
LQPRGDGPR
SCF_FBXL2
0.0833
p.E328K
DO47272
SKCM
ICGC
LQPRGDGPR
SCF_FBXL2
0.0833
p.V329G
DO48382
BLCA
ICGC
LQPRGDGPR
SCF_FBXL2
0.1111
p.R336H
DO234392
ESAD
ICGC
LQPRGDGPR
SCF_FBXL2
0.3056
p.R336H
DO234417
ESAD
ICGC
LQPRGDGPR
SCF_FBXL2
0.3056
p.V334A
DO233207
GACA
ICGC
LQPRGDGPR
SCF_FBXL2
0.25
p.P330H
DO24675
LUAD
ICGC
LQPRGDGPR
SCF_FBXL2
0.1389
p.P342S
DO45527
LUSC
ICGC
LQPRGDGPR
SCF_FBXL2
0.6752
p.R340W
DO227570
PACA
ICGC
LQPRGDGPR
SCF_FBXL2
0.8634
p.G355R
DO48665
SKCM
ICGC
LQPRGDGPR
SCF_FBXL2
0.0556
p.G341W
DO229218
THCA
ICGC
LQPRGDGPR
SCF_FBXL2
0.7825
p.A334V
SIDM01203
Other Solid Cancers
GDSC
LQPRGDGPR
SCF_FBXL2
0.25
p.A334V
NTERA-2_cl_D1
testis
COSMIC
LQPRGDGPR
SCF_FBXL2
0.25
p.R353Q
SIDM00014
Colorectal Carcinoma
GDSC
LQPRGDGPR
SCF_FBXL2
0.1111
p.R353Q
LIM1215
large_intestine
COSMIC
LQPRGDGPR
SCF_FBXL2
0.1111
p.H327L
SIDM00622
Glioblastoma
GDSC
LQPRGDGPR
SCF_FBXL2
0.0556
p.H327L
D-247MG
central_nervous_system
COSMIC
LQPRGDGPR
SCF_FBXL2
0.0556
p.G352V
ACH-000979
Prostate Cancer
CCLE
LQPRGDGPR
SCF_FBXL2
0.1389
p.G352V
DU-145
prostate
COSMIC
LQPRGDGPR
SCF_FBXL2
0.1389
p.P344T
ACH-001680
Lymphoma
CCLE
LQPRGDGPR
SCF_FBXL2
0.5919
p.P344T
U-698-M
haematopoietic_and_lymphoid_tissue
COSMIC
LQPRGDGPR
SCF_FBXL2
0.5919
p.R340Q
LIM1215
large_intestine
COSMIC
LQPRGDGPR
SCF_FBXL2
0.7329
p.R352Q
LIM1215
large_intestine
COSMIC
LQPRGDGPR
SCF_FBXL2
0.1389
p.A333V
NTERA-2_cl_D1
testis
COSMIC
LQPRGDGPR
SCF_FBXL2
0.2222
Drug responses associated with NEU4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQPRGDGPR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWR8
Sialidase-4
SCF_FBXL2
337:345
LQPRGDGPR
FBXL2
0.989
More...