DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQQPRGRR
Uniprot ID:
O00425
Source protein:
Insulin-like growth factor 2 mRNA-binding protein 3
Source gene:
IGF2BP3
Class:
SCF_FBXL2
Location:
165:172
E3 ligase:
FBXL2
DEGRON score:
0.9485
ASA_SCORE:
109.15
COIL:
0.9113
CONS_SCORE:
0.3679
DSS_SCORE:
0.7867
HELIX:
0.0638
FCONS_SCORE:
0.8708
RIG_SCORE:
0.6569
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R172W
DO50823
LICA
ICGC
LQQPRGRR
SCF_FBXL2
0.7523
p.I172L
SNU-C1
large_intestine
COSMIC
LQQPRGRR
SCF_FBXL2
0.7174
p.R171H
TCGA-DF-A2KU
UCEC
TCGA
LQQPRGRR
SCF_FBXL2
0.7133
p.R171H
DO223286
UCEC
ICGC
LQQPRGRR
SCF_FBXL2
0.7133
p.R172Q
SIDM00715
Non-Small Cell Lung Carcinoma
GDSC
LQQPRGRR
SCF_FBXL2
0.6218
p.R172Q
ACH-000521
Lung Cancer
CCLE
LQQPRGRR
SCF_FBXL2
0.6218
p.R172Q
NCI-H2030
lung
COSMIC
LQQPRGRR
SCF_FBXL2
0.6218
p.A164V
639-V
urinary_tract
COSMIC
LQQPRGRR
SCF_FBXL2
0.3056
p.G175R
TCGA-XF-A9T0
BLCA
TCGA
LQQPRGRR
SCF_FBXL2
0.25
p.G175R
DO51920
BLCA
ICGC
LQQPRGRR
SCF_FBXL2
0.25
p.A160T
TCGA-CM-6679
COAD
TCGA
LQQPRGRR
SCF_FBXL2
0.1944
p.A160T
DO8272
COAD
ICGC
LQQPRGRR
SCF_FBXL2
0.1944
p.A160T
DO231086
LUSC
ICGC
LQQPRGRR
SCF_FBXL2
0.1944
p.R181M
TCGA-13-0894
OV
TCGA
LQQPRGRR
SCF_FBXL2
0.0833
p.R181M
DO28591
OV
ICGC
LQQPRGRR
SCF_FBXL2
0.0833
p.D156N
ACH-000975
Lung Cancer
CCLE
LQQPRGRR
SCF_FBXL2
0.0833
p.Q182H
SIDM01617
Endometrial Carcinoma
GDSC
LQQPRGRR
SCF_FBXL2
0.0556
p.Q182H
ACH-000994
Endometrial/Uterine Cancer
CCLE
LQQPRGRR
SCF_FBXL2
0.0556
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Drug responses associated with IGF2BP3 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LQQPRGRR
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00425
Insulin-like growth factor 2 mRNA-binding protein 3
SCF_FBXL2
165:172
LQQPRGRR
FBXL2
0.9485
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