DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQQPRGRR
Uniprot ID:
O00425
Source protein:
Insulin-like growth factor 2 mRNA-binding protein 3
Source gene:
IGF2BP3
Class:
SCF_FBXL2
Location:
165:172
E3 ligase:
FBXL2
DEGRON score:
0.9485
ASA_SCORE:
109.15
COIL:
0.9113
CONS_SCORE:
0.3679
DSS_SCORE:
0.7867
HELIX:
0.0638
FCONS_SCORE:
0.8708
RIG_SCORE:
0.6569
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R181M
TCGA-13-0894
OV
TCGA
LQQPRGRR
SCF_FBXL2
0.0833
p.R181M
DO28591
OV
ICGC
LQQPRGRR
SCF_FBXL2
0.0833
p.A160T
TCGA-CM-6679
COAD
TCGA
LQQPRGRR
SCF_FBXL2
0.1944
p.A160T
DO8272
COAD
ICGC
LQQPRGRR
SCF_FBXL2
0.1944
p.A160T
DO231086
LUSC
ICGC
LQQPRGRR
SCF_FBXL2
0.1944
p.R171H
TCGA-DF-A2KU
UCEC
TCGA
LQQPRGRR
SCF_FBXL2
0.7133
p.R171H
DO223286
UCEC
ICGC
LQQPRGRR
SCF_FBXL2
0.7133
p.G175R
TCGA-XF-A9T0
BLCA
TCGA
LQQPRGRR
SCF_FBXL2
0.25
p.G175R
DO51920
BLCA
ICGC
LQQPRGRR
SCF_FBXL2
0.25
p.R172W
DO50823
LICA
ICGC
LQQPRGRR
SCF_FBXL2
0.7523
p.R172Q
SIDM00715
Non-Small Cell Lung Carcinoma
GDSC
LQQPRGRR
SCF_FBXL2
0.6218
p.R172Q
ACH-000521
Lung Cancer
CCLE
LQQPRGRR
SCF_FBXL2
0.6218
p.R172Q
NCI-H2030
lung
COSMIC
LQQPRGRR
SCF_FBXL2
0.6218
p.Q182H
SIDM01617
Endometrial Carcinoma
GDSC
LQQPRGRR
SCF_FBXL2
0.0556
p.Q182H
ACH-000994
Endometrial/Uterine Cancer
CCLE
LQQPRGRR
SCF_FBXL2
0.0556
p.D156N
ACH-000975
Lung Cancer
CCLE
LQQPRGRR
SCF_FBXL2
0.0833
p.A164V
639-V
urinary_tract
COSMIC
LQQPRGRR
SCF_FBXL2
0.3056
p.I172L
SNU-C1
large_intestine
COSMIC
LQQPRGRR
SCF_FBXL2
0.7174
Drug responses associated with IGF2BP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQQPRGRR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00425
Insulin-like growth factor 2 mRNA-binding protein 3
SCF_FBXL2
165:172
LQQPRGRR
FBXL2
0.9485
More...