DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQQTPMIS
Uniprot ID:
Q93074
Source protein:
Mediator of RNA polymerase II transcription subunit 12
Source gene:
MED12
Class:
DEG_SCF_FBW7_1
Location:
2021:2028
E3 ligase:
FBXW7
DEGRON score:
0.6235
ASA_SCORE:
97.5375
COIL:
0.8671
CONS_SCORE:
0.3641
DSS_SCORE:
0.617
HELIX:
0.0955
FCONS_SCORE:
0.9767
RIG_SCORE:
0.7426
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2025T
TCGA-55-A492
LUAD
TCGA
LQQTPMIS
DEG_SCF_FBW7_1
0.7031
p.R2015M
TCGA-62-A46O
LUAD
TCGA
LQQTPMIS
DEG_SCF_FBW7_1
0.1667
p.V2038I
TCGA-AA-3864
COAD
TCGA
LQQTPMIS
DEG_SCF_FBW7_1
0.0556
p.M2033I
TCGA-DK-A3X1
BLCA
TCGA
LQQTPMIS
DEG_SCF_FBW7_1
0.1944
p.M2036I
DO447
BLCA
ICGC
LQQTPMIS
DEG_SCF_FBW7_1
0.1111
p.H2021Y
DO225028
BRCA
ICGC
LQQTPMIS
DEG_SCF_FBW7_1
0.7229
p.S2031N
DO230343
COCA
ICGC
LQQTPMIS
DEG_SCF_FBW7_1
0.25
p.P2028T
DO23708
LUAD
ICGC
LQQTPMIS
DEG_SCF_FBW7_1
0.7031
p.R2018M
DO26240
LUAD
ICGC
LQQTPMIS
DEG_SCF_FBW7_1
0.25
p.I2027M
SIDM00845
Burkitt's Lymphoma
GDSC
LQQTPMIS
DEG_SCF_FBW7_1
0.6507
p.S2028G
SIDM00845
Burkitt's Lymphoma
GDSC
LQQTPMIS
DEG_SCF_FBW7_1
0.6993
p.A2035V
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LQQTPMIS
DEG_SCF_FBW7_1
0.1389
p.A2035V
ACH-002256
Leukemia
CCLE
LQQTPMIS
DEG_SCF_FBW7_1
0.1389
p.A2035V
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LQQTPMIS
DEG_SCF_FBW7_1
0.1389
p.T2029S
SIDM00118
Colorectal Carcinoma
GDSC
LQQTPMIS
DEG_SCF_FBW7_1
0.3056
p.T2029S
ACH-001081
Colon/Colorectal Cancer
CCLE
LQQTPMIS
DEG_SCF_FBW7_1
0.3056
p.T2029S
HCC2998
large_intestine
COSMIC
LQQTPMIS
DEG_SCF_FBW7_1
0.3056
p.T2021I
MCC13
skin
COSMIC
LQQTPMIS
DEG_SCF_FBW7_1
0.7078
p.A2034V
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LQQTPMIS
DEG_SCF_FBW7_1
0.1667
p.T2028S
HCC2998
large_intestine
COSMIC
LQQTPMIS
DEG_SCF_FBW7_1
0.7116
Drug responses associated with MED12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQQTPMIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q93074
Mediator of RNA polymerase II transcription subunit 12
DEG_SCF_FBW7_1
2021:2028
LQQTPMIS
FBXW7
0.6235
More...