DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LQRLTRGSR
Uniprot ID:
Q6ZVC0
Source protein:
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1
Source gene:
NYAP1
Class:
SCF_FBXL2
Location:
193:201
E3 ligase:
FBXL2
DEGRON score:
0.7863
ASA_SCORE:
105.5
COIL:
0.8362
CONS_SCORE:
0.4402
DSS_SCORE:
0.6138
HELIX:
0.1471
FCONS_SCORE:
0.7688
RIG_SCORE:
0.696
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q194K
TCGA-06-2557
GBM
TCGA
LQRLTRGSR
SCF_FBXL2
0.6944
p.P184S
TCGA-21-1079
LUSC
TCGA
LQRLTRGSR
SCF_FBXL2
0.0833
p.P192L
TCGA-69-A59K
LUAD
TCGA
LQRLTRGSR
SCF_FBXL2
0.3056
p.P192L
DO45335
LUAD
ICGC
LQRLTRGSR
SCF_FBXL2
0.3056
p.Q194P
TCGA-B5-A1MR
UCEC
TCGA
LQRLTRGSR
SCF_FBXL2
0.7035
p.Q194P
DO41758
UCEC
ICGC
LQRLTRGSR
SCF_FBXL2
0.7035
p.V202I
TCGA-BH-A0HF
BRCA
TCGA
LQRLTRGSR
SCF_FBXL2
0.3056
p.V202I
DO1749
BRCA
ICGC
LQRLTRGSR
SCF_FBXL2
0.3056
p.R201Q
TCGA-CV-7099
HNSC
TCGA
LQRLTRGSR
SCF_FBXL2
0.7329
p.R201Q
TCGA-D5-6540
COAD
TCGA
LQRLTRGSR
SCF_FBXL2
0.7329
p.R187Q
TCGA-DS-A1OB
CESC
TCGA
LQRLTRGSR
SCF_FBXL2
0.1667
p.G183D
TCGA-KN-8428
KICH
TCGA
LQRLTRGSR
SCF_FBXL2
0.0556
p.P187Q
DO234232
ESAD
ICGC
LQRLTRGSR
SCF_FBXL2
0.1667
p.A193V
DO11854
GBM
ICGC
LQRLTRGSR
SCF_FBXL2
0.6936
p.P186S
DO229135
LMS
ICGC
LQRLTRGSR
SCF_FBXL2
0.1389
p.G183V
DO45402
LUAD
ICGC
LQRLTRGSR
SCF_FBXL2
0.0556
p.G184S
DO220881
MELA
ICGC
LQRLTRGSR
SCF_FBXL2
0.0833
p.N190I
SIDM00364
B-Lymphoblastic Leukemia
GDSC
LQRLTRGSR
SCF_FBXL2
0.25
p.N190I
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LQRLTRGSR
SCF_FBXL2
0.25
p.A210S
SIDM00345
Non-Small Cell Lung Carcinoma
GDSC
LQRLTRGSR
SCF_FBXL2
0.0833
p.A210S
ACH-000627
Lung Cancer
CCLE
LQRLTRGSR
SCF_FBXL2
0.0833
p.A210S
LCLC-103H
lung
COSMIC
LQRLTRGSR
SCF_FBXL2
0.0833
p.L191V
ACH-001853
Bile Duct Cancer
CCLE
LQRLTRGSR
SCF_FBXL2
0.2778
Drug responses associated with NYAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQRLTRGSR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZVC0
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1
SCF_FBXL2
193:201
LQRLTRGSR
FBXL2
0.7863
More...