DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQSRGRRLR
Uniprot ID:
Q8IYG6
Source protein:
Leucine-rich repeat-containing protein 56
Source gene:
LRRC56
Class:
SCF_FBXL2
Location:
472:480
E3 ligase:
FBXL2
DEGRON score:
0.9729
ASA_SCORE:
79.3111
COIL:
0.6153
CONS_SCORE:
0.3589
DSS_SCORE:
0.4656
HELIX:
0.2637
FCONS_SCORE:
1.2185
RIG_SCORE:
0.726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D471G
TCGA-BR-8680
STAD
TCGA
LQSRGRRLR
SCF_FBXL2
0.3056
p.D471G
DO47769
STAD
ICGC
LQSRGRRLR
SCF_FBXL2
0.3056
p.Q473K
TCGA-CR-7367
HNSC
TCGA
LQSRGRRLR
SCF_FBXL2
0.6944
p.Q473K
DO15999
HNSC
ICGC
LQSRGRRLR
SCF_FBXL2
0.6944
p.P466L
TCGA-D3-A2JL
SKCM
TCGA
LQSRGRRLR
SCF_FBXL2
0.1667
p.P466L
DO47278
SKCM
ICGC
LQSRGRRLR
SCF_FBXL2
0.1667
p.R480L
TCGA-EE-A2MK
SKCM
TCGA
LQSRGRRLR
SCF_FBXL2
0.7316
p.R480L
DO38177
SKCM
ICGC
LQSRGRRLR
SCF_FBXL2
0.7316
p.Q473E
TCGA-FI-A3PX
UCEC
TCGA
LQSRGRRLR
SCF_FBXL2
0.6744
p.Q473E
DO52417
UCEC
ICGC
LQSRGRRLR
SCF_FBXL2
0.6744
p.R477C
TCGA-HU-A4GU
STAD
TCGA
LQSRGRRLR
SCF_FBXL2
0.719
p.R477C
DO47849
STAD
ICGC
LQSRGRRLR
SCF_FBXL2
0.719
p.R477C
SIDM02015
Colorectal Carcinoma
GDSC
LQSRGRRLR
SCF_FBXL2
0.719
p.R467Q
DO229480
LAML
ICGC
LQSRGRRLR
SCF_FBXL2
0.1944
p.R467Q
DO230993
LUSC
ICGC
LQSRGRRLR
SCF_FBXL2
0.1944
p.R467W
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
LQSRGRRLR
SCF_FBXL2
0.1944
p.R467W
ACH-000980
Lung Cancer
CCLE
LQSRGRRLR
SCF_FBXL2
0.1944
p.R467W
NCI-H1155
lung
COSMIC
LQSRGRRLR
SCF_FBXL2
0.1944
p.W485L
SIDM01617
Endometrial Carcinoma
GDSC
LQSRGRRLR
SCF_FBXL2
0.1944
p.W485L
ACH-000994
Endometrial/Uterine Cancer
CCLE
LQSRGRRLR
SCF_FBXL2
0.1944
Drug responses associated with LRRC56 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQSRGRRLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYG6
Leucine-rich repeat-containing protein 56
SCF_FBXL2
472:480
LQSRGRRLR
FBXL2
0.9729
More...