DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQSTPLGS
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
DEG_SCF_FBW7_1
Location:
62:69
E3 ligase:
FBXW7
DEGRON score:
0.9954
ASA_SCORE:
86.1875
COIL:
0.96
CONS_SCORE:
0.2358
DSS_SCORE:
0.6013
HELIX:
0.0183
FCONS_SCORE:
0.8945
RIG_SCORE:
0.6197
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A56T
TCGA-DU-6392
LGG
TCGA
LQSTPLGS
DEG_SCF_FBW7_1
0.1667
p.A56T
DO22237
LGG
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.1667
p.D53N
TCGA-EE-A2MT
SKCM
TCGA
LQSTPLGS
DEG_SCF_FBW7_1
0.0833
p.D53N
DO50694
ORCA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.0833
p.D53N
DO38051
SKCM
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.0833
p.A61V
TCGA-HU-A4H8
STAD
TCGA
LQSTPLGS
DEG_SCF_FBW7_1
0.3056
p.A61V
DO47869
STAD
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.3056
p.S70L
TCGA-QB-A6FS
SKCM
TCGA
LQSTPLGS
DEG_SCF_FBW7_1
0.3056
p.S70L
DO48654
SKCM
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.3056
p.P76H
DO222414
BTCA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.1389
p.T68P
DO228799
GACA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.7031
p.T68P
DO229350
LAML
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.7031
p.L67M
DO228976
LICA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.5999
p.S79P
DO228976
LICA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.0556
p.S79P
DO229027
LICA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.0556
p.S79P
ACH-000349
Breast Cancer
CCLE
LQSTPLGS
DEG_SCF_FBW7_1
0.0556
p.P54T
DO229026
LICA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.1111
p.P76S
DO222714
MELA
ICGC
LQSTPLGS
DEG_SCF_FBW7_1
0.1389
p.P55A
ACH-000780
Lung Cancer
CCLE
LQSTPLGS
DEG_SCF_FBW7_1
0.1389
p.P55A
NCI-H1105
lung
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.1389
p.L71H
ACH-000999
Colon/Colorectal Cancer
CCLE
LQSTPLGS
DEG_SCF_FBW7_1
0.2778
p.L71H
SNU-1040
large_intestine
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.2778
p.P70S
ACH-001190
Skin Cancer
CCLE
LQSTPLGS
DEG_SCF_FBW7_1
0.3056
p.P70S
SK-MEL-2
skin
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.3056
p.P55S
ACH-002166
Skin Cancer
CCLE
LQSTPLGS
DEG_SCF_FBW7_1
0.1389
p.P55S
MZ7-mel
skin
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.1389
p.P54L
COLO-680N
oesophagus
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.1111
p.P54L
EB2
haematopoietic_and_lymphoid_tissue
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.1111
p.P54L
NCI-H748
lung
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.1111
p.R53L
NCI-H748
lung
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.0833
p.R53L
EB2
haematopoietic_and_lymphoid_tissue
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.0833
p.P66A
MHH-CALL-2
haematopoietic_and_lymphoid_tissue
COSMIC
LQSTPLGS
DEG_SCF_FBW7_1
0.7503
Drug responses associated with SEC16A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQSTPLGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_SCF_FBW7_1
62:69
LQSTPLGS
FBXW7
0.9954
More...