DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQTPIPS
Uniprot ID:
Q8HWS3
Source protein:
DNA-binding protein RFX6
Source gene:
RFX6
Class:
DEG_SCF_FBW7_1
Location:
874:880
E3 ligase:
FBXW7
DEGRON score:
0.9478
ASA_SCORE:
84.2571
COIL:
0.9136
CONS_SCORE:
0.2569
DSS_SCORE:
0.4508
HELIX:
0.0504
FCONS_SCORE:
1.0539
RIG_SCORE:
0.6858
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R866G
TCGA-43-2576
LUSC
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866G
DO27005
LUSC
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
TCGA-AA-A00N
COAD
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
TCGA-AG-A002
READ
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
TCGA-B5-A11N
UCEC
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
TCGA-EI-6917
READ
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
DO9876
COAD
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
DO36881
READ
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
DO229459
SKCA
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
DO41458
UCEC
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
SIDM00503
Gastric Carcinoma
GDSC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
ACH-000633
Gastric Cancer
CCLE
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.R866Q
FU97
stomach
COSMIC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.C885R
TCGA-AR-A1AI
BRCA
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1944
p.C885R
TCGA-B5-A3FA
UCEC
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1944
p.C885R
DO4689
BRCA
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1944
p.C885R
DO231977
LICA
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1944
p.C885R
DO52402
UCEC
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1944
p.G888E
TCGA-D3-A1Q7
SKCM
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.G888E
TCGA-EB-A431
SKCM
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.G888E
DO37671
SKCM
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.G888E
DO37981
SKCM
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.1111
p.P879S
TCGA-D9-A3Z4
SKCM
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.5641
p.P879S
DO37623
SKCM
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.5641
p.S890F
TCGA-EE-A29E
SKCM
TCGA
LQTPIPS
DEG_SCF_FBW7_1
0.0556
p.S890F
DO37831
SKCM
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.0556
p.S890P
DO48413
BLCA
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.0556
p.L874F
DO228971
LICA
ICGC
LQTPIPS
DEG_SCF_FBW7_1
0.6981
p.Q875K
SIDM00672
Hepatocellular Carcinoma
GDSC
LQTPIPS
DEG_SCF_FBW7_1
0.5833
p.Q875K
ACH-000625
Liver Cancer
CCLE
LQTPIPS
DEG_SCF_FBW7_1
0.5833
p.Q875K
Hep_3B2_1-7
NS
COSMIC
LQTPIPS
DEG_SCF_FBW7_1
0.5833
p.S872F
SIDM01175
Other Sarcomas
GDSC
LQTPIPS
DEG_SCF_FBW7_1
0.2778
p.S872F
ACH-002309
Sarcoma
CCLE
LQTPIPS
DEG_SCF_FBW7_1
0.2778
p.S872F
SW684
soft_tissue
COSMIC
LQTPIPS
DEG_SCF_FBW7_1
0.2778
p.L870P
SIDM01060
Melanoma
GDSC
LQTPIPS
DEG_SCF_FBW7_1
0.2222
p.L870P
ACH-000882
Skin Cancer
CCLE
LQTPIPS
DEG_SCF_FBW7_1
0.2222
p.L870P
IGR-1
skin
COSMIC
LQTPIPS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with RFX6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQTPIPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8HWS3
DNA-binding protein RFX6
DEG_SCF_FBW7_1
874:880
LQTPIPS
FBXW7
0.9478
More...