DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQTPSLS
Uniprot ID:
Q13029
Source protein:
PR domain zinc finger protein 2
Source gene:
PRDM2
Class:
DEG_SCF_FBW7_1
Location:
951:957
E3 ligase:
FBXW7
DEGRON score:
0.9552
ASA_SCORE:
83.6
COIL:
0.9114
CONS_SCORE:
0.385
DSS_SCORE:
0.6378
HELIX:
0.0599
FCONS_SCORE:
0.9362
RIG_SCORE:
0.6343
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D943Y
TCGA-97-7554
LUAD
TCGA
LQTPSLS
DEG_SCF_FBW7_1
0.1111
p.D943Y
DO23592
LUAD
ICGC
LQTPSLS
DEG_SCF_FBW7_1
0.1111
p.S955F
TCGA-EE-A2MR
SKCM
TCGA
LQTPSLS
DEG_SCF_FBW7_1
0.6871
p.G959C
DO228986
LICA
ICGC
LQTPSLS
DEG_SCF_FBW7_1
0.2778
p.S957L
DO229456
SKCA
ICGC
LQTPSLS
DEG_SCF_FBW7_1
0.7667
p.S953Y
DO47849
STAD
ICGC
LQTPSLS
DEG_SCF_FBW7_1
0.712
p.T941I
SIDM01090
Colorectal Carcinoma
GDSC
LQTPSLS
DEG_SCF_FBW7_1
0.0556
p.T941I
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
LQTPSLS
DEG_SCF_FBW7_1
0.0556
p.T941I
SIDM01409
Bladder Carcinoma
GDSC
LQTPSLS
DEG_SCF_FBW7_1
0.0556
p.K946N
NCI-H2227
lung
COSMIC
LQTPSLS
DEG_SCF_FBW7_1
0.1944
p.F961L
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
LQTPSLS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with PRDM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LQTPSLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13029
PR domain zinc finger protein 2
DEG_SCF_FBW7_1
951:957
LQTPSLS
FBXW7
0.9552
More...