DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRADLRHVP
Uniprot ID:
O15230
Source protein:
Laminin subunit alpha-5
Source gene:
LAMA5
Class:
DEG_APCC_DBOX_1
Location:
1674:1682
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8684
ASA_SCORE:
53.3778
COIL:
0.5657
CONS_SCORE:
0.3353
DSS_SCORE:
0.4581
HELIX:
0.1618
FCONS_SCORE:
1.2646
RIG_SCORE:
0.7612
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1687Q
TCGA-B8-5164
KIRC
TCGA
LRADLRHVP
DEG_APCC_DBOX_1
0.1944
p.E1687Q
DO17018
KIRC
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.1944
p.L1678M
TCGA-D1-A2G0
UCEC
TCGA
LRADLRHVP
DEG_APCC_DBOX_1
0.711
p.L1678M
DO43049
UCEC
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.711
p.T1671A
TCGA-EO-A22X
UCEC
TCGA
LRADLRHVP
DEG_APCC_DBOX_1
0.25
p.T1671A
DO43907
UCEC
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.25
p.V1681M
TCGA-L5-A43E
ESCA
TCGA
LRADLRHVP
DEG_APCC_DBOX_1
0.6097
p.R1679W
DO222768
BTCA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.7523
p.E1666K
DO224685
COCA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.1111
p.V1681L
DO228924
LICA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.5654
p.A1684D
DO228974
LICA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.2778
p.H1665Q
DO229022
LICA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.0833
p.T1671K
DO229038
LICA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.25
p.R1667W
DO230550
LUSC
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.1389
p.A1688S
DO229268
THCA
ICGC
LRADLRHVP
DEG_APCC_DBOX_1
0.1667
p.R1667Q
SIDM01268
Colorectal Carcinoma
GDSC
LRADLRHVP
DEG_APCC_DBOX_1
0.1389
p.R1667Q
SIDM00233
T-Lymphoblastic Leukemia
GDSC
LRADLRHVP
DEG_APCC_DBOX_1
0.1389
p.R1667Q
SIDM00164
Biliary Tract Carcinoma
GDSC
LRADLRHVP
DEG_APCC_DBOX_1
0.1389
p.E1691K
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
LRADLRHVP
DEG_APCC_DBOX_1
0.0833
p.E1691K
ACH-000784
Esophageal Cancer
CCLE
LRADLRHVP
DEG_APCC_DBOX_1
0.0833
p.E1691K
KYSE-70
oesophagus
COSMIC
LRADLRHVP
DEG_APCC_DBOX_1
0.0833
Drug responses associated with LAMA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRADLRHVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15230
Laminin subunit alpha-5
DEG_APCC_DBOX_1
1674:1682
LRADLRHVP
APC,CDC20,FZR1
0.8684
More...