DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRANLKSVK
Uniprot ID:
P19237
Source protein:
Troponin I, slow skeletal muscle
Source gene:
TNNI1
Class:
DEG_APCC_DBOX_1
Location:
138:146
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9821
ASA_SCORE:
81.9667
COIL:
0.4866
CONS_SCORE:
0.7749
DSS_SCORE:
0.4742
HELIX:
0.3876
FCONS_SCORE:
1.6489
RIG_SCORE:
0.7411
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R139W
TCGA-14-1827
GBM
TCGA
LRANLKSVK
DEG_APCC_DBOX_1
0.8634
p.R139W
DO12046
GBM
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.8634
p.R139W
SIDM02021
Esophageal Carcinoma
GDSC
LRANLKSVK
DEG_APCC_DBOX_1
0.8634
p.H132Q
TCGA-21-1083
LUSC
TCGA
LRANLKSVK
DEG_APCC_DBOX_1
0.1667
p.H132Q
DO26769
LUSC
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.1667
p.S144Y
TCGA-EO-A22R
UCEC
TCGA
LRANLKSVK
DEG_APCC_DBOX_1
0.6009
p.S144Y
DO42713
UCEC
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.6009
p.R154L
TCGA-FS-A1ZG
SKCM
TCGA
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
p.R154L
DO37523
SKCM
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
p.S130F
TCGA-XF-A9T0
BLCA
TCGA
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
p.S130F
DO51920
BLCA
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
p.V145M
DO233944
GACA
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.6097
p.V145M
DO229248
THCA
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.6097
p.E148D
DO36556
READ
ICGC
LRANLKSVK
DEG_APCC_DBOX_1
0.2778
p.R154Q
SIDM00116
Non-Small Cell Lung Carcinoma
GDSC
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
p.R154Q
ACH-000343
Lung Cancer
CCLE
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
p.R154Q
NCI-H522
lung
COSMIC
LRANLKSVK
DEG_APCC_DBOX_1
0.1111
Drug responses associated with TNNI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRANLKSVK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P19237
Troponin I, slow skeletal muscle
DEG_APCC_DBOX_1
138:146
LRANLKSVK
APC,CDC20,FZR1
0.9821
More...