DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRCELSKMA
Uniprot ID:
Q5VST9
Source protein:
Obscurin
Source gene:
OBSCN
Class:
DEG_APCC_DBOX_1
Location:
3645:3653
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.716
ASA_SCORE:
60
COIL:
0.4421
CONS_SCORE:
0.4929
DSS_SCORE:
0.2721
HELIX:
0.0042
FCONS_SCORE:
0.923
RIG_SCORE:
0.8343
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A3642V
TCGA-06-5416
GBM
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.A3642V
TCGA-AA-A010
COAD
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.A3642V
TCGA-AF-2693
READ
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.A3642V
DO48282
ESCA
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.A3642V
DO10880
GBM
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.A3642V
DO36766
READ
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.R3662C
TCGA-AA-3815
COAD
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662C
TCGA-B5-A11J
UCEC
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662C
TCGA-M8-A5N4
PAAD
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662C
DO9924
COAD
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662C
DO50264
PAAD
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662C
DO43698
UCEC
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.V3652I
TCGA-D1-A17Q
UCEC
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.7076
p.V3652I
DO41903
UCEC
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.7076
p.V3652I
SIDM02015
Colorectal Carcinoma
GDSC
LRCELSKMA
DEG_APCC_DBOX_1
0.7076
p.P3655L
TCGA-EB-A24D
SKCM
TCGA
LRCELSKMA
DEG_APCC_DBOX_1
0.2778
p.P3655L
DO37440
SKCM
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.2778
p.V3644L
DO228916
LICA
ICGC
LRCELSKMA
DEG_APCC_DBOX_1
0.3056
p.V3644M
SIDM00373
Endometrial Carcinoma
GDSC
LRCELSKMA
DEG_APCC_DBOX_1
0.3056
p.V3644M
ACH-000974
Endometrial/Uterine Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.3056
p.V3644M
ACH-002026
Endometrial/Uterine Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.3056
p.V3644M
SNG-M
endometrium
COSMIC
LRCELSKMA
DEG_APCC_DBOX_1
0.3056
p.S3660I
SIDM01088
Endometrial Carcinoma
GDSC
LRCELSKMA
DEG_APCC_DBOX_1
0.1389
p.S3660I
ACH-000965
Endometrial/Uterine Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.1389
p.S3660I
RL95-2
endometrium
COSMIC
LRCELSKMA
DEG_APCC_DBOX_1
0.1389
p.R3662P
SIDM00837
Colorectal Carcinoma
GDSC
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662P
ACH-000958
Colon/Colorectal Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662P
SW48
large_intestine
COSMIC
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662H
SIDM01617
Endometrial Carcinoma
GDSC
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.R3662H
ACH-000994
Endometrial/Uterine Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.0833
p.A3642G
ACH-001024
Skin Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.6944
p.P3643A
ACH-001853
Bile Duct Cancer
CCLE
LRCELSKMA
DEG_APCC_DBOX_1
0.2778
p.A3653G
IGROV-1
ovary
COSMIC
LRCELSKMA
DEG_APCC_DBOX_1
0.6429
p.V3655L
NCI-H441
lung
COSMIC
LRCELSKMA
DEG_APCC_DBOX_1
0.2778
p.R3646W
HUH-6-clone5
liver
COSMIC
LRCELSKMA
DEG_APCC_DBOX_1
0.8634
Drug responses associated with OBSCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRCELSKMA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VST9
Obscurin
DEG_APCC_DBOX_1
3645:3653
LRCELSKMA
APC,CDC20,FZR1
0.716
More...