DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRDSLLDVV
Uniprot ID:
Q14159
Source protein:
DNA repair-scaffolding protein
Source gene:
SPIDR
Class:
DEG_APCC_DBOX_1
Location:
461:469
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5231
ASA_SCORE:
54.2778
COIL:
0.2706
CONS_SCORE:
0.3903
DSS_SCORE:
0.4049
HELIX:
0.7042
FCONS_SCORE:
1.2341
RIG_SCORE:
0.8156
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D467Y
TCGA-68-8250
LUSC
TCGA
LRDSLLDVV
DEG_APCC_DBOX_1
0.6214
p.W477R
TCGA-BF-AAP8
SKCM
TCGA
LRDSLLDVV
DEG_APCC_DBOX_1
0.1111
p.R454C
TCGA-G4-6306
COAD
TCGA
LRDSLLDVV
DEG_APCC_DBOX_1
0.1389
p.R454C
TCGA-HU-A4GT
STAD
TCGA
LRDSLLDVV
DEG_APCC_DBOX_1
0.1389
p.R454C
SIDM00217
Colorectal Carcinoma
GDSC
LRDSLLDVV
DEG_APCC_DBOX_1
0.1389
p.R454C
SNU-1040
large_intestine
COSMIC
LRDSLLDVV
DEG_APCC_DBOX_1
0.1389
p.C454W
DO9002
COAD
ICGC
LRDSLLDVV
DEG_APCC_DBOX_1
0.1389
p.S467L
DO8264
COAD
ICGC
LRDSLLDVV
DEG_APCC_DBOX_1
0.7667
p.E463D
DO229037
LICA
ICGC
LRDSLLDVV
DEG_APCC_DBOX_1
0.6758
p.E459G
DO26530
LUSC
ICGC
LRDSLLDVV
DEG_APCC_DBOX_1
0.2778
p.M476T
ACH-001303
Neuroblastoma
CCLE
LRDSLLDVV
DEG_APCC_DBOX_1
0.1389
p.G458S
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
LRDSLLDVV
DEG_APCC_DBOX_1
0.25
p.G468S
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
LRDSLLDVV
DEG_APCC_DBOX_1
0.6993
Drug responses associated with SPIDR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRDSLLDVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14159
DNA repair-scaffolding protein
DEG_APCC_DBOX_1
461:469
LRDSLLDVV
APC,CDC20,FZR1
0.5231
More...