DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LREDLLSLQ
Uniprot ID:
P01266
Source protein:
Thyroglobulin
Source gene:
TG
Class:
DEG_APCC_DBOX_1
Location:
2751:2759
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5989
ASA_SCORE:
78.2556
COIL:
0.5264
CONS_SCORE:
0.2577
DSS_SCORE:
0.6429
HELIX:
0.3161
FCONS_SCORE:
0.6924
RIG_SCORE:
0.732
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2745F
TCGA-29-1694
OV
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.1667
p.S2757T
TCGA-86-8672
LUAD
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.6005
p.G2748A
TCGA-BA-A6DA
HNSC
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.25
p.S2763T
TCGA-CC-A9FW
LIHC
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.2222
p.S2757R
TCGA-D1-A15X
UCEC
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.6316
p.Y2766C
TCGA-D1-A1NY
UCEC
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.1389
p.E2743D
TCGA-D1-A2G0
UCEC
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.1111
p.E2742K
TCGA-D3-A8GL
SKCM
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.0833
p.E2753K
TCGA-EK-A3GK
CESC
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.591
p.A2747T
TCGA-GN-A26C
SKCM
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.2222
p.E2741K
TCGA-H4-A2HQ
BLCA
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.0556
p.T2746M
TCGA-RP-A690
SKCM
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.1944
p.E2744K
TCGA-W3-AA21
SKCM
TCGA
LREDLLSLQ
DEG_APCC_DBOX_1
0.1389
p.E2741G
SIDM00722
Mesothelioma
GDSC
LREDLLSLQ
DEG_APCC_DBOX_1
0.0556
p.E2741G
NCI-H2452
pleura
COSMIC
LREDLLSLQ
DEG_APCC_DBOX_1
0.0556
p.L2758F
SIDM00190
Melanoma
GDSC
LREDLLSLQ
DEG_APCC_DBOX_1
0.6981
p.L2758F
ACH-002097
Skin Cancer
CCLE
LREDLLSLQ
DEG_APCC_DBOX_1
0.6981
p.L2758F
CP66-MEL
skin
COSMIC
LREDLLSLQ
DEG_APCC_DBOX_1
0.6981
p.L2756R
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
LREDLLSLQ
DEG_APCC_DBOX_1
0.7316
p.L2756R
ACH-002221
Lymphoma
CCLE
LREDLLSLQ
DEG_APCC_DBOX_1
0.7316
p.L2756R
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LREDLLSLQ
DEG_APCC_DBOX_1
0.7316
Drug responses associated with TG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LREDLLSLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01266
Thyroglobulin
DEG_APCC_DBOX_1
2751:2759
LREDLLSLQ
APC,CDC20,FZR1
0.5989
More...