DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LREELSHIN
Uniprot ID:
Q5VVM6
Source protein:
Coiled-coil domain-containing protein 30
Source gene:
CCDC30
Class:
DEG_APCC_DBOX_1
Location:
198:206
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5465
ASA_SCORE:
104.5333
COIL:
0.2053
CONS_SCORE:
0.5924
DSS_SCORE:
0.5497
HELIX:
0.7921
FCONS_SCORE:
1.0893
RIG_SCORE:
0.758
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q207E
TCGA-4Z-AA86
BLCA
TCGA
LREELSHIN
DEG_APCC_DBOX_1
0.3056
p.Q207E
DO218989
BLCA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.3056
p.V196L
TCGA-BA-4077
HNSC
TCGA
LREELSHIN
DEG_APCC_DBOX_1
0.2778
p.V196L
DO15647
HNSC
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.2778
p.E201Q
TCGA-DK-AA6W
BLCA
TCGA
LREELSHIN
DEG_APCC_DBOX_1
0.5633
p.E201Q
DO219009
BLCA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.5633
p.G216W
TCGA-EE-A3AD
SKCM
TCGA
LREELSHIN
DEG_APCC_DBOX_1
0.0556
p.G216W
DO37707
SKCM
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.0556
p.L188I
TCGA-EO-A22U
UCEC
TCGA
LREELSHIN
DEG_APCC_DBOX_1
0.0556
p.L188I
DO43755
UCEC
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.0556
p.E201K
TCGA-YC-A89H
BLCA
TCGA
LREELSHIN
DEG_APCC_DBOX_1
0.591
p.E201K
DO51948
BLCA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.591
p.T212I
DO9876
COAD
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.1667
p.Q214H
DO222798
COCA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.1111
p.Q214R
DO13863
GBM
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.1111
p.D215Y
DO228974
LICA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.0833
p.R197M
DO229027
LICA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.3056
p.R208S
DO229058
LICA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.2778
p.V203I
DO219552
LIHC
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.7076
p.I205V
DO23456
LINC
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.5965
p.V203L
DO32912
PACA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.6765
p.L213S
DO38016
SKCM
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.1389
p.Q207H
DO229264
THCA
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.3056
p.K216T
DO43907
UCEC
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.0556
p.Q190K
DO43755
UCEC
ICGC
LREELSHIN
DEG_APCC_DBOX_1
0.1111
p.P192H
SIDM00282
Colorectal Carcinoma
GDSC
LREELSHIN
DEG_APCC_DBOX_1
0.1667
p.P192H
ACH-000998
Colon/Colorectal Cancer
CCLE
LREELSHIN
DEG_APCC_DBOX_1
0.1667
p.P192H
CW-2
large_intestine
COSMIC
LREELSHIN
DEG_APCC_DBOX_1
0.1667
p.L197W
EPLC-272H
lung
COSMIC
LREELSHIN
DEG_APCC_DBOX_1
0.3056
Drug responses associated with CCDC30 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LREELSHIN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VVM6
Coiled-coil domain-containing protein 30
DEG_APCC_DBOX_1
198:206
LREELSHIN
APC,CDC20,FZR1
0.5465
More...