DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LREGLGSLH
Uniprot ID:
P32927
Source protein:
Cytokine receptor common subunit beta
Source gene:
CSF2RB
Class:
DEG_APCC_DBOX_1
Location:
293:301
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7577
ASA_SCORE:
80.7778
COIL:
0.6062
CONS_SCORE:
0.2605
DSS_SCORE:
0.4195
HELIX:
0.0338
FCONS_SCORE:
0.6995
RIG_SCORE:
0.6684
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G298S
TCGA-12-0619
GBM
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.5882
p.G298S
TCGA-12-0692
GBM
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.5882
p.G298S
DO12898
GBM
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.5882
p.G298S
DO14025
GBM
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.5882
p.P311H
TCGA-55-6969
LUAD
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.0556
p.H301Q
TCGA-55-8089
LUAD
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.647
p.P311S
TCGA-CZ-4864
KIRC
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.0556
p.C306R
TCGA-D1-A17M
UCEC
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.1944
p.C306R
DO43779
UCEC
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.1944
p.D283N
TCGA-D3-A3C8
SKCM
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.0556
p.D283N
DO47636
SKCM
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.0556
p.P309L
TCGA-D6-6516
HNSC
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.1111
p.P309L
DO15623
HNSC
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.1111
p.G285W
TCGA-DF-A2KU
UCEC
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.1111
p.H301N
TCGA-EO-A3AV
UCEC
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.6312
p.H301Y
TCGA-FI-A2D0
UCEC
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.6118
p.H301Y
DO43891
UCEC
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.6118
p.V310M
TCGA-KO-8408
KICH
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.0833
p.E286K
TCGA-RP-A695
SKCM
TCGA
LREGLGSLH
DEG_APCC_DBOX_1
0.1389
p.E286K
DO51270
SKCM
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.1389
p.E286K
SIDM00973
Melanoma
GDSC
LREGLGSLH
DEG_APCC_DBOX_1
0.1389
p.E286K
WM793B
skin
COSMIC
LREGLGSLH
DEG_APCC_DBOX_1
0.1389
p.A288S
DO228936
LICA
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.1944
p.E295K
DO222402
MELA
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.591
p.R304H
DO51953
PRAD
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.25
p.M310I
DO220011
SARC
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.0833
p.M310I
DO42033
UCEC
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.0833
p.K309I
DO43907
UCEC
ICGC
LREGLGSLH
DEG_APCC_DBOX_1
0.1111
p.R294K
SIDM01005
Acute Myeloid Leukemia
GDSC
LREGLGSLH
DEG_APCC_DBOX_1
0.7237
p.R294K
ACH-000263
Leukemia
CCLE
LREGLGSLH
DEG_APCC_DBOX_1
0.7237
p.R294K
KASUMI-1
haematopoietic_and_lymphoid_tissue
COSMIC
LREGLGSLH
DEG_APCC_DBOX_1
0.7237
p.L297V
SIDM01689
B-Lymphoblastic Leukemia
GDSC
LREGLGSLH
DEG_APCC_DBOX_1
0.6765
p.T302I
ACH-001521
Skin Cancer
CCLE
LREGLGSLH
DEG_APCC_DBOX_1
0.3056
p.E292K
WM793B
skin
COSMIC
LREGLGSLH
DEG_APCC_DBOX_1
0.3056
p.R300K
KASUMI-1
haematopoietic_and_lymphoid_tissue
COSMIC
LREGLGSLH
DEG_APCC_DBOX_1
0.7237
Drug responses associated with CSF2RB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LREGLGSLH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P32927
Cytokine receptor common subunit beta
DEG_APCC_DBOX_1
293:301
LREGLGSLH
APC,CDC20,FZR1
0.7577
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