DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LREKLDGLA
Uniprot ID:
Q86Y22
Source protein:
Collagen alpha-1
Source gene:
COL23A1
Class:
DEG_APCC_DBOX_1
Location:
96:104
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8291
ASA_SCORE:
81.9556
COIL:
0.7546
CONS_SCORE:
0.9263
DSS_SCORE:
0.381
HELIX:
0.1956
FCONS_SCORE:
1.0047
RIG_SCORE:
0.7801
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R110L
TCGA-D3-A3CE
SKCM
TCGA
LREKLDGLA
DEG_APCC_DBOX_1
0.1667
p.R110L
TCGA-EE-A29E
SKCM
TCGA
LREKLDGLA
DEG_APCC_DBOX_1
0.1667
p.R110L
DO37831
SKCM
ICGC
LREKLDGLA
DEG_APCC_DBOX_1
0.1667
p.R110L
DO37405
SKCM
ICGC
LREKLDGLA
DEG_APCC_DBOX_1
0.1667
p.G102R
DO51009
LAML
ICGC
LREKLDGLA
DEG_APCC_DBOX_1
0.6457
p.R110W
DO222875
MELA
ICGC
LREKLDGLA
DEG_APCC_DBOX_1
0.1667
p.R107W
SIDM01962
Colorectal Carcinoma
GDSC
LREKLDGLA
DEG_APCC_DBOX_1
0.25
p.A104E
SIDM00133
Non-Small Cell Lung Carcinoma
GDSC
LREKLDGLA
DEG_APCC_DBOX_1
0.659
p.A104E
ACH-000861
Lung Cancer
CCLE
LREKLDGLA
DEG_APCC_DBOX_1
0.659
p.A104E
HOP-62
lung
COSMIC
LREKLDGLA
DEG_APCC_DBOX_1
0.659
p.G102E
SIDM00140
Melanoma
GDSC
LREKLDGLA
DEG_APCC_DBOX_1
0.6087
p.G102E
ACH-000968
Skin Cancer
CCLE
LREKLDGLA
DEG_APCC_DBOX_1
0.6087
p.G102E
COLO-792
skin
COSMIC
LREKLDGLA
DEG_APCC_DBOX_1
0.6087
Drug responses associated with COL23A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LREKLDGLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86Y22
Collagen alpha-1
DEG_APCC_DBOX_1
96:104
LREKLDGLA
APC,CDC20,FZR1
0.8291
More...