DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LREKLKSMT
Uniprot ID:
Q6P6C2
Source protein:
RNA demethylase ALKBH5
Source gene:
ALKBH5
Class:
DEG_APCC_DBOX_1
Location:
10:18
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9648
ASA_SCORE:
75.5889
COIL:
0.3049
CONS_SCORE:
0.5764
DSS_SCORE:
0.4276
HELIX:
0.6814
FCONS_SCORE:
1.2284
RIG_SCORE:
0.775
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S22G
DO227987
COCA
ICGC
LREKLKSMT
DEG_APCC_DBOX_1
0.2222
p.Y26C
DO45346
LUAD
ICGC
LREKLKSMT
DEG_APCC_DBOX_1
0.1111
p.S16T
DO229242
THCA
ICGC
LREKLKSMT
DEG_APCC_DBOX_1
0.6005
p.R17W
DO41847
UCEC
ICGC
LREKLKSMT
DEG_APCC_DBOX_1
0.8634
p.A4S
ACH-000427
Gastric Cancer
CCLE
LREKLKSMT
DEG_APCC_DBOX_1
0.2778
p.R16P
ACH-000962
Ovarian Cancer
CCLE
LREKLKSMT
DEG_APCC_DBOX_1
0.7512
p.R16P
ACH-001145
Ovarian Cancer
CCLE
LREKLKSMT
DEG_APCC_DBOX_1
0.7512
p.R16P
OC-314
ovary
COSMIC
LREKLKSMT
DEG_APCC_DBOX_1
0.7512
p.S16P
ACH-000990
Endometrial/Uterine Cancer
CCLE
LREKLKSMT
DEG_APCC_DBOX_1
0.5641
p.R18K
ACH-000990
Endometrial/Uterine Cancer
CCLE
LREKLKSMT
DEG_APCC_DBOX_1
0.7237
p.R28H
ACH-000999
Colon/Colorectal Cancer
CCLE
LREKLKSMT
DEG_APCC_DBOX_1
0.0556
p.R28H
SNU-1040
large_intestine
COSMIC
LREKLKSMT
DEG_APCC_DBOX_1
0.0556
Drug responses associated with ALKBH5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LREKLKSMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P6C2
RNA demethylase ALKBH5
DEG_APCC_DBOX_1
10:18
LREKLKSMT
APC,CDC20,FZR1
0.9648
More...