DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LREKLNKLR
Uniprot ID:
Q5T9S5
Source protein:
Coiled-coil domain-containing protein 18
Source gene:
CCDC18
Class:
DEG_APCC_DBOX_1
Location:
116:124
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8686
ASA_SCORE:
110.2444
COIL:
0.013
CONS_SCORE:
0.6274
DSS_SCORE:
0.3856
HELIX:
0.9879
FCONS_SCORE:
1.201
RIG_SCORE:
0.7871
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y108C
TCGA-B0-5693
KIRC
TCGA
LREKLNKLR
DEG_APCC_DBOX_1
0.1111
p.E116Q
TCGA-ZF-AA53
BLCA
TCGA
LREKLNKLR
DEG_APCC_DBOX_1
0.6744
p.A107T
DO222953
BTCA
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.0833
p.V131I
DO15807
HNSC
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.1389
p.L111F
DO230990
LUSC
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.1944
p.L120R
DO50291
SKCM
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.8428
p.Q125R
DO229248
THCA
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.3056
p.E133D
DO42033
UCEC
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.0833
p.Q133H
DO43186
UCEC
ICGC
LREKLNKLR
DEG_APCC_DBOX_1
0.0833
Drug responses associated with CCDC18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LREKLNKLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T9S5
Coiled-coil domain-containing protein 18
DEG_APCC_DBOX_1
116:124
LREKLNKLR
APC,CDC20,FZR1
0.8686
More...