DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRFSLGHVQ
Uniprot ID:
O43157
Source protein:
Plexin-B1
Source gene:
PLXNB1
Class:
DEG_APCC_DBOX_1
Location:
1468:1476
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.878
ASA_SCORE:
47.0111
COIL:
0.2449
CONS_SCORE:
0.6888
DSS_SCORE:
0.3121
HELIX:
0.0087
FCONS_SCORE:
1.1849
RIG_SCORE:
0.7641
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1469C
TCGA-A6-2686
COAD
TCGA
LRFSLGHVQ
DEG_APCC_DBOX_1
0.8301
p.P1482H
TCGA-AP-A051
UCEC
TCGA
LRFSLGHVQ
DEG_APCC_DBOX_1
0.1667
p.L1468S
TCGA-BR-8487
STAD
TCGA
LRFSLGHVQ
DEG_APCC_DBOX_1
0.6556
p.P1486S
TCGA-EB-A6QZ
SKCM
TCGA
LRFSLGHVQ
DEG_APCC_DBOX_1
0.0556
p.L1476V
DO223051
ESCA
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.6765
p.T1470I
DO233258
GACA
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.7078
p.D1471E
DO229029
LICA
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.6758
p.T1470N
DO50660
ORCA
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.7055
p.Q1483K
DO37966
SKCM
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.1389
p.L1477V
DO39910
THCA
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.3056
p.V1460M
DO42568
UCEC
ICGC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.1111
p.R1469H
SIDM00889
Cervical Carcinoma
GDSC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.8244
p.R1469H
ACH-001333
Cervical Cancer
CCLE
LRFSLGHVQ
DEG_APCC_DBOX_1
0.8244
p.R1469H
C-33-A
cervix
COSMIC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.8244
p.R1474H
SNU-1040
large_intestine
COSMIC
LRFSLGHVQ
DEG_APCC_DBOX_1
0.8244
Drug responses associated with PLXNB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRFSLGHVQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43157
Plexin-B1
DEG_APCC_DBOX_1
1468:1476
LRFSLGHVQ
APC,CDC20,FZR1
0.878
More...