DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRGELDTMS
Uniprot ID:
P49454
Source protein:
Centromere protein F
Source gene:
CENPF
Class:
DEG_APCC_DBOX_1
Location:
1963:1971
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6042
ASA_SCORE:
90.1333
COIL:
0.0377
CONS_SCORE:
0.3421
DSS_SCORE:
0.4919
HELIX:
0.9636
FCONS_SCORE:
1.0421
RIG_SCORE:
0.7313
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1954L
TCGA-05-4397
LUAD
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.0833
p.S1954L
TCGA-CQ-5334
HNSC
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.0833
p.S1954L
DO16053
HNSC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.0833
p.S1954L
DO25320
LUAD
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.0833
p.R1964C
TCGA-4E-A92E
UCEC
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.8301
p.R1964C
DO228972
LICA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.8301
p.R1964C
DO223277
UCEC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.8301
p.D1978Y
TCGA-99-8025
LUAD
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.D1978Y
DO24255
LUAD
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.R1960I
TCGA-A5-A2K5
UCEC
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.25
p.R1960I
TCGA-CA-6717
COAD
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.25
p.R1960I
DO8898
COAD
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.25
p.R1960I
DO8264
COAD
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.25
p.R1960I
DO222762
COCA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.25
p.R1960I
DO41379
UCEC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.25
p.S1971T
TCGA-AP-A0LM
UCEC
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.6005
p.S1971T
DO43306
UCEC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.6005
p.T1974N
TCGA-B5-A11E
UCEC
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.6944
p.T1974N
DO41644
UCEC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.6944
p.T1974N
SIDM01043
Other Sarcomas
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6944
p.T1974N
ACH-000913
Endometrial/Uterine Cancer
CCLE
LRGELDTMS
DEG_APCC_DBOX_1
0.6944
p.T1974N
ESS-1
endometrium
COSMIC
LRGELDTMS
DEG_APCC_DBOX_1
0.6944
p.K1973N
TCGA-BK-A6W3
UCEC
TCGA
LRGELDTMS
DEG_APCC_DBOX_1
0.7222
p.K1973N
DO50076
UCEC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.7222
p.D1978G
DO230334
COCA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.D1978G
DO229010
COCA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.D1978G
DO228941
LICA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.D1978G
DO228974
LICA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.D1978G
DO229047
LICA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.D1978G
DO52365
LUSC
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.1389
p.T1975M
DO233944
GACA
ICGC
LRGELDTMS
DEG_APCC_DBOX_1
0.6667
p.T1975M
SIDM00694
Other Solid Cancers
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6667
p.T1975M
SIDM00930
Osteosarcoma
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6667
p.T1975M
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6667
p.T1975M
SIDM01409
Bladder Carcinoma
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6667
p.T1975M
SIDM01619
Endometrial Carcinoma
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6667
p.M1970V
SIDM00954
Breast Carcinoma
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.6097
p.S1971P
SIDM00217
Colorectal Carcinoma
GDSC
LRGELDTMS
DEG_APCC_DBOX_1
0.5641
p.S1971P
ACH-000999
Colon/Colorectal Cancer
CCLE
LRGELDTMS
DEG_APCC_DBOX_1
0.5641
p.S1971P
SNU-1040
large_intestine
COSMIC
LRGELDTMS
DEG_APCC_DBOX_1
0.5641
Drug responses associated with CENPF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGELDTMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49454
Centromere protein F
DEG_APCC_DBOX_1
1963:1971
LRGELDTMS
APC,CDC20,FZR1
0.6042
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