DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRGILATLA
Uniprot ID:
Q86US8
Source protein:
Telomerase-binding protein EST1A
Source gene:
SMG6
Class:
DEG_APCC_DBOX_1
Location:
15:23
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9368
ASA_SCORE:
53.5444
COIL:
0.2636
CONS_SCORE:
0.2659
DSS_SCORE:
0.4048
HELIX:
0.7282
FCONS_SCORE:
1.0176
RIG_SCORE:
0.7574
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N31K
TCGA-C8-A1HM
BRCA
TCGA
LRGILATLA
DEG_APCC_DBOX_1
0.1111
p.N31K
DO3904
BRCA
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.1111
p.R30H
DO10332
COAD
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.1389
p.R30H
DO47819
STAD
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.1389
p.Q33K
DO228948
LICA
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.1667
p.L19M
DO228948
LICA
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.711
p.Q33P
DO29890
OV
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.1667
p.S11F
DO229211
THCA
ICGC
LRGILATLA
DEG_APCC_DBOX_1
0.6667
p.M32T
SIDM00496
Thyroid Gland Carcinoma
GDSC
LRGILATLA
DEG_APCC_DBOX_1
0.0833
p.M32T
ACH-001350
Thyroid Cancer
CCLE
LRGILATLA
DEG_APCC_DBOX_1
0.0833
p.M32T
HTC-C3
thyroid
COSMIC
LRGILATLA
DEG_APCC_DBOX_1
0.0833
p.I18N
ACH-000982
Colon/Colorectal Cancer
CCLE
LRGILATLA
DEG_APCC_DBOX_1
0.6169
p.I18N
ACH-001345
Colon/Colorectal Cancer
CCLE
LRGILATLA
DEG_APCC_DBOX_1
0.6169
p.R16H
ACH-000995
Leukemia
CCLE
LRGILATLA
DEG_APCC_DBOX_1
0.8244
Drug responses associated with SMG6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGILATLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86US8
Telomerase-binding protein EST1A
DEG_APCC_DBOX_1
15:23
LRGILATLA
APC,CDC20,FZR1
0.9368
More...