DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRGILKLLQ
Uniprot ID:
Q99959
Source protein:
Plakophilin-2
Source gene:
PKP2
Class:
DEG_APCC_DBOX_1
Location:
394:402
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7102
ASA_SCORE:
53.4333
COIL:
0.4256
CONS_SCORE:
0.6622
DSS_SCORE:
0.0504
HELIX:
0.5288
FCONS_SCORE:
1.2041
RIG_SCORE:
0.9083
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R388W
TCGA-D3-A8GI
SKCM
TCGA
LRGILKLLQ
DEG_APCC_DBOX_1
0.1667
p.R388W
DO229456
SKCA
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.1667
p.R388W
DO50284
SKCM
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.1667
p.R390K
TCGA-D3-A8GL
SKCM
TCGA
LRGILKLLQ
DEG_APCC_DBOX_1
0.2222
p.R390K
DO50287
SKCM
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.2222
p.R390K
Sarc9371
bone
COSMIC
LRGILKLLQ
DEG_APCC_DBOX_1
0.2222
p.R395C
TCGA-EE-A2MR
SKCM
TCGA
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.R395C
TCGA-ER-A199
SKCM
TCGA
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.R395C
TCGA-YG-AA3N
SKCM
TCGA
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.R395C
DO222702
MELA
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.R395C
DO37819
SKCM
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.R395C
DO47395
SKCM
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.R395C
DO51298
SKCM
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.8301
p.L394F
TCGA-FW-A3R5
SKCM
TCGA
LRGILKLLQ
DEG_APCC_DBOX_1
0.587
p.L394F
DO37406
SKCM
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.587
p.G396D
DO228957
LICA
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.6087
p.Q407K
DO229038
LICA
ICGC
LRGILKLLQ
DEG_APCC_DBOX_1
0.1944
Drug responses associated with PKP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGILKLLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99959
Plakophilin-2
DEG_APCC_DBOX_1
394:402
LRGILKLLQ
APC,CDC20,FZR1
0.7102
More...