DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRGLLEMME
Uniprot ID:
Q86W92
Source protein:
Liprin-beta-1
Source gene:
PPFIBP1
Class:
DEG_APCC_DBOX_1
Location:
55:63
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7822
ASA_SCORE:
68.9
COIL:
0.1919
CONS_SCORE:
0.6579
DSS_SCORE:
0.3316
HELIX:
0.8036
FCONS_SCORE:
1.0338
RIG_SCORE:
0.8002
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V52L
TCGA-44-7670
LUAD
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.25
p.V52L
DO23555
LUAD
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.25
p.R56C
TCGA-AP-A1DR
UCEC
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.8301
p.R56C
DO43747
UCEC
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.8301
p.R56L
TCGA-B0-5117
KIRC
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.8428
p.R56L
DO17987
KIRC
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.8428
p.R56L
DO228985
LICA
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.8428
p.A48D
TCGA-EI-7002
READ
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.1389
p.A48D
DO36598
READ
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.1389
p.L70M
TCGA-FD-A3SJ
BLCA
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.1389
p.L70M
DO681
BLCA
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.1389
p.D65Y
TCGA-FI-A2D5
UCEC
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.2778
p.D65Y
DO41331
UCEC
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.2778
p.E68D
TCGA-G3-A7M9
LIHC
TCGA
LRGLLEMME
DEG_APCC_DBOX_1
0.1944
p.E68D
DO49694
LIHC
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.1944
p.R56H
DO234295
ESAD
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.8244
p.R56H
SIDM00217
Colorectal Carcinoma
GDSC
LRGLLEMME
DEG_APCC_DBOX_1
0.8244
p.R56H
ACH-000999
Colon/Colorectal Cancer
CCLE
LRGLLEMME
DEG_APCC_DBOX_1
0.8244
p.R56H
SNU-1040
large_intestine
COSMIC
LRGLLEMME
DEG_APCC_DBOX_1
0.8244
p.L49V
DO234133
THCA
ICGC
LRGLLEMME
DEG_APCC_DBOX_1
0.1667
p.D54Y
SIDM00017
Squamous Cell Lung Carcinoma
GDSC
LRGLLEMME
DEG_APCC_DBOX_1
0.3056
p.D54Y
ACH-000912
Lung Cancer
CCLE
LRGLLEMME
DEG_APCC_DBOX_1
0.3056
p.E48K
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
LRGLLEMME
DEG_APCC_DBOX_1
0.1389
p.R58S
HTC-C3
thyroid
COSMIC
LRGLLEMME
DEG_APCC_DBOX_1
0.7427
p.D65G
MKN1
stomach
COSMIC
LRGLLEMME
DEG_APCC_DBOX_1
0.2778
Drug responses associated with PPFIBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGLLEMME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86W92
Liprin-beta-1
DEG_APCC_DBOX_1
55:63
LRGLLEMME
APC,CDC20,FZR1
0.7822
More...