DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LRGLLQVLQ
Uniprot ID:
A6NC98
Source protein:
Coiled-coil domain-containing protein 88B
Source gene:
CCDC88B
Class:
DEG_APCC_DBOX_1
Location:
471:479
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5518
ASA_SCORE:
86.1222
COIL:
0.0878
CONS_SCORE:
0.5057
DSS_SCORE:
0.5277
HELIX:
0.9151
FCONS_SCORE:
1.3251
RIG_SCORE:
0.7453
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E467D
TCGA-EO-A22U
UCEC
TCGA
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2222
p.E467D
DO43755
UCEC
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2222
p.E470K
TCGA-EO-A22U
UCEC
TCGA
LRGLLQVLQ
DEG_APCC_DBOX_1
0.3056
p.E470K
DO43755
UCEC
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.3056
p.V477L
DO229015
LICA
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.5654
p.G489V
DO229025
LICA
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.0556
p.R472L
DO229026
LICA
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.8428
p.G484S
DO23316
LINC
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.1944
p.R469Q
DO231102
LUSC
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2778
p.R469Q
SIDM00570
Gastric Carcinoma
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2778
p.R469Q
SIDM01511
Gastric Carcinoma
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2778
p.P485L
DO51268
SKCM
ICGC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.1667
p.P482T
SIDM00871
Non-Cancerous
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.25
p.G483W
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2222
p.G483W
ACH-000945
Lung Cancer
CCLE
LRGLLQVLQ
DEG_APCC_DBOX_1
0.2222
p.R472W
SIDM00420
Bladder Carcinoma
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.8634
p.G484D
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.1944
p.G484D
SIDM01611
Endometrial Carcinoma
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.1944
p.G484D
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.1944
p.R462Q
SIDM00951
T-Lymphoblastic Leukemia
GDSC
LRGLLQVLQ
DEG_APCC_DBOX_1
0.0833
p.R462Q
ACH-002222
Leukemia
CCLE
LRGLLQVLQ
DEG_APCC_DBOX_1
0.0833
Drug responses associated with CCDC88B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGLLQVLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NC98
Coiled-coil domain-containing protein 88B
DEG_APCC_DBOX_1
471:479
LRGLLQVLQ
APC,CDC20,FZR1
0.5518
More...