DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRGQLRLLE
Uniprot ID:
Q8TE82
Source protein:
SH3 domain and tetratricopeptide repeat-containing protein 1
Source gene:
SH3TC1
Class:
DEG_APCC_DBOX_1
Location:
106:114
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7593
ASA_SCORE:
56.0889
COIL:
0.1186
CONS_SCORE:
0.6687
DSS_SCORE:
0.3401
HELIX:
0.8748
FCONS_SCORE:
1.2129
RIG_SCORE:
0.7865
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D116N
TCGA-5L-AAT1
BRCA
TCGA
LRGQLRLLE
DEG_APCC_DBOX_1
0.2778
p.D116N
DO219594
BRCA
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.2778
p.R98L
TCGA-D3-A2JG
SKCM
TCGA
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98L
DO47613
SKCM
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R107W
TCGA-FZ-5921
PAAD
TCGA
LRGQLRLLE
DEG_APCC_DBOX_1
0.8634
p.V101I
DO233855
GACA
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1944
p.V108F
DO228978
LICA
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.7068
p.W107L
DO24320
LUAD
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.7015
p.T105N
DO229232
THCA
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.3056
p.G101S
DO43218
UCEC
ICGC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1944
p.G101S
ACH-002024
Colon/Colorectal Cancer
CCLE
LRGQLRLLE
DEG_APCC_DBOX_1
0.1944
p.R98Q
SIDM00499
Prostate Carcinoma
GDSC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98Q
SIDM00566
Oral Cavity Carcinoma
GDSC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98Q
SIDM00289
B-Lymphoblastic Leukemia
GDSC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98Q
SIDM01444
Glioblastoma
GDSC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98Q
OSC-19
upper_aerodigestive_tract
COSMIC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98Q
22RV1
prostate
COSMIC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R98Q
HAL-01
haematopoietic_and_lymphoid_tissue
COSMIC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.R122H
SIDM01180
Hepatocellular Carcinoma
GDSC
LRGQLRLLE
DEG_APCC_DBOX_1
0.1111
p.V123M
ACH-001289
Rhabdoid
CCLE
LRGQLRLLE
DEG_APCC_DBOX_1
0.0833
p.R107Q
HCC-56
large_intestine
COSMIC
LRGQLRLLE
DEG_APCC_DBOX_1
0.7329
Drug responses associated with SH3TC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGQLRLLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TE82
SH3 domain and tetratricopeptide repeat-containing protein 1
DEG_APCC_DBOX_1
106:114
LRGQLRLLE
APC,CDC20,FZR1
0.7593
More...