DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRGTLRPLK
Uniprot ID:
Q8NFF2
Source protein:
Sodium/potassium/calcium exchanger 4
Source gene:
SLC24A4
Class:
DEG_APCC_DBOX_1
Location:
3:11
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8299
ASA_SCORE:
114.4889
COIL:
0.8616
CONS_SCORE:
0.2103
DSS_SCORE:
0.4776
HELIX:
0.0908
FCONS_SCORE:
0.9112
RIG_SCORE:
0.8115
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2V
TCGA-AA-3877
COAD
TCGA
LRGTLRPLK
DEG_APCC_DBOX_1
0.3056
p.A2V
DO7855
COAD
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.3056
p.R8Q
TCGA-AZ-6598
COAD
TCGA
LRGTLRPLK
DEG_APCC_DBOX_1
0.6218
p.R8Q
DO10276
COAD
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.6218
p.R8Q
DO233855
GACA
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.6218
p.T6I
DO575
BLCA
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.7078
p.R13L
DO225154
BRCA
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.2778
p.G5V
DO229024
LICA
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.6421
p.A17V
DO38185
STAD
ICGC
LRGTLRPLK
DEG_APCC_DBOX_1
0.1667
Drug responses associated with SLC24A4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRGTLRPLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFF2
Sodium/potassium/calcium exchanger 4
DEG_APCC_DBOX_1
3:11
LRGTLRPLK
APC,CDC20,FZR1
0.8299
More...