DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRHPLRRLE
Uniprot ID:
Q99959
Source protein:
Plakophilin-2
Source gene:
PKP2
Class:
DEG_APCC_DBOX_1
Location:
141:149
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9509
ASA_SCORE:
111.0111
COIL:
0.8124
CONS_SCORE:
0.3671
DSS_SCORE:
0.5868
HELIX:
0.0843
FCONS_SCORE:
0.8738
RIG_SCORE:
0.7053
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R142K
TCGA-62-A46R
LUAD
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.7237
p.R142K
DO45355
LUAD
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.7237
p.R142S
TCGA-64-5781
LUAD
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.7427
p.R142S
DO23740
LUAD
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.7427
p.R142M
TCGA-64-5781
LUAD
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.R142M
DO23740
LUAD
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.R142M
SIDM00758
Non-Small Cell Lung Carcinoma
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.R142M
SIDM00757
Non-Small Cell Lung Carcinoma
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.R142M
ACH-000590
Lung Cancer
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.R142M
ACH-001137
Lung Cancer
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.R142M
NCI-H1993
lung
COSMIC
LRHPLRRLE
DEG_APCC_DBOX_1
0.8632
p.E157Q
TCGA-68-8251
LUSC
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.1111
p.E157Q
DO26858
LUSC
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.1111
p.R158K
TCGA-BH-A0HF
BRCA
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
DO1749
BRCA
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
DO229346
LAML
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
SIDM00437
Acute Myeloid Leukemia
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
SIDM01151
Hepatocellular Carcinoma
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
SIDM00487
Colorectal Carcinoma
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
CCK-81
large_intestine
COSMIC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
MOLM-13
haematopoietic_and_lymphoid_tissue
COSMIC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.R158K
SNU-182
liver
COSMIC
LRHPLRRLE
DEG_APCC_DBOX_1
0.0833
p.S132F
TCGA-CQ-A4C6
HNSC
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.5278
p.S132F
DO49047
HNSC
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.5278
p.S132F
ACH-000635
Ovarian Cancer
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.5278
p.E137K
TCGA-D3-A8GM
SKCM
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.2222
p.E137K
DO50288
SKCM
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.2222
p.E138K
TCGA-W3-AA1Q
SKCM
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.25
p.E138K
DO219487
SKCM
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.25
p.P144S
TCGA-W3-AA1V
SKCM
TCGA
LRHPLRRLE
DEG_APCC_DBOX_1
0.5641
p.P144S
DO51276
SKCM
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.5641
p.E149A
DO1156
BRCA
ICGC
LRHPLRRLE
DEG_APCC_DBOX_1
0.659
p.S140T
SIDM01095
Rhabdomyosarcoma
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.75
p.S140T
ACH-000833
Sarcoma
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.75
p.S140T
SJRH30
soft_tissue
COSMIC
LRHPLRRLE
DEG_APCC_DBOX_1
0.75
p.S151F
SIDM00281
Other Solid Cancers
GDSC
LRHPLRRLE
DEG_APCC_DBOX_1
0.7222
p.S151F
ACH-002100
Skin Cancer
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.7222
p.S151F
DJM-1
skin
COSMIC
LRHPLRRLE
DEG_APCC_DBOX_1
0.7222
p.R147S
ACH-000712
Lung Cancer
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.6316
p.R147K
ACH-000712
Lung Cancer
CCLE
LRHPLRRLE
DEG_APCC_DBOX_1
0.6126
Drug responses associated with PKP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRHPLRRLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99959
Plakophilin-2
DEG_APCC_DBOX_1
141:149
LRHPLRRLE
APC,CDC20,FZR1
0.9509
More...