DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRIHGD
Uniprot ID:
A8MTB9
Source protein:
Carcinoembryonic antigen-related cell adhesion molecule 18
Source gene:
CEACAM18
Class:
LIG_APCC_ABBA_1
Location:
330:335
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8273
ASA_SCORE:
44.25
COIL:
0.219
CONS_SCORE:
0.926
DSS_SCORE:
0.1764
HELIX:
0.0035
FCONS_SCORE:
1.3711
RIG_SCORE:
0.7484
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H327R
TCGA-AA-3947
COAD
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.25
p.H327R
DO8192
COAD
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.25
p.D339Y
TCGA-AX-A06F
UCEC
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.2222
p.D339Y
DO41752
UCEC
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.2222
p.F321V
TCGA-BR-4357
STAD
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.0833
p.F321V
TCGA-D5-6931
COAD
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.0833
p.F321V
DO8384
COAD
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0833
p.F321V
DO233748
GACA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0833
p.F321V
DO38241
STAD
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0833
p.S333F
TCGA-D3-A51G
SKCM
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.7982
p.S333F
TCGA-LH-A9QB
SKCM
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.7982
p.S333F
DO47700
SKCM
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.7982
p.S333F
DO51266
SKCM
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.7982
p.N336S
TCGA-DA-A1I7
SKCM
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.3056
p.N336S
DO37951
SKCM
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.3056
p.M342I
TCGA-EE-A29D
SKCM
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.1389
p.M342I
DO38123
SKCM
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.1389
p.S320F
TCGA-EE-A2MJ
SKCM
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.S320F
DO218900
SKCA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.S320F
DO38099
SKCM
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.L334V
TCGA-XC-AA0X
LUSC
TCGA
LRIHGD
LIG_APCC_ABBA_1
0.6765
p.L334V
DO52026
LUSC
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.6765
p.L320I
DO227935
BRCA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.S345W
DO233925
GACA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.W345S
DO230659
LAML
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.W345S
SIDM00251
Gastric Carcinoma
GDSC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.W345S
SIDM00618
Hepatocellular Carcinoma
GDSC
LRIHGD
LIG_APCC_ABBA_1
0.0556
p.G334V
DO229045
LICA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.6421
p.H339Y
DO220895
MELA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.2222
p.L324F
DO222363
MELA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.1667
p.A343V
DO228138
PBCA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.1111
p.P324L
DO229491
SKCA
ICGC
LRIHGD
LIG_APCC_ABBA_1
0.1667
p.P324L
ACH-000676
Brain Cancer
CCLE
LRIHGD
LIG_APCC_ABBA_1
0.1667
p.R331M
SIDM01943
Colorectal Carcinoma
GDSC
LRIHGD
LIG_APCC_ABBA_1
0.7521
p.C322R
SIDM00007
Other Solid Cancers
GDSC
LRIHGD
LIG_APCC_ABBA_1
0.1111
p.C322R
ACH-001550
Skin Cancer
CCLE
LRIHGD
LIG_APCC_ABBA_1
0.1111
p.C322F
SIDM00007
Other Solid Cancers
GDSC
LRIHGD
LIG_APCC_ABBA_1
0.1111
p.C322F
ACH-001550
Skin Cancer
CCLE
LRIHGD
LIG_APCC_ABBA_1
0.1111
p.P324S
SIDM00070
B-Cell Non-Hodgkin's Lymphoma
GDSC
LRIHGD
LIG_APCC_ABBA_1
0.1667
p.G344W
ACH-000666
Lung Cancer
CCLE
LRIHGD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with CEACAM18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRIHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MTB9
Carcinoembryonic antigen-related cell adhesion molecule 18
LIG_APCC_ABBA_1
330:335
LRIHGD
APC,CDC20,FZR1
0.8273
More...