DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRIKLKPLD
Uniprot ID:
Q96MC5
Source protein:
bMERB domain-containing protein 1
Source gene:
BMERB1
Class:
DEG_APCC_DBOX_1
Location:
152:160
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8007
ASA_SCORE:
102.1556
COIL:
0.5704
CONS_SCORE:
0.8201
DSS_SCORE:
0.4171
HELIX:
0.42
FCONS_SCORE:
1.092
RIG_SCORE:
0.7859
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L159V
SIDM00057
Neuroblastoma
GDSC
LRIKLKPLD
DEG_APCC_DBOX_1
0.5654
p.L159V
SIDM00552
Rhabdomyosarcoma
GDSC
LRIKLKPLD
DEG_APCC_DBOX_1
0.5654
p.M148I
SIDM01394
Kidney Carcinoma
GDSC
LRIKLKPLD
DEG_APCC_DBOX_1
0.2222
p.D145N
SIDM01387
Small Cell Lung Carcinoma
GDSC
LRIKLKPLD
DEG_APCC_DBOX_1
0.1389
Drug responses associated with BMERB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRIKLKPLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96MC5
bMERB domain-containing protein 1
DEG_APCC_DBOX_1
152:160
LRIKLKPLD
APC,CDC20,FZR1
0.8007
More...