DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKKLKGIN
Uniprot ID:
O15050
Source protein:
TPR and ankyrin repeat-containing protein 1
Source gene:
TRANK1
Class:
DEG_APCC_DBOX_1
Location:
926:934
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7479
ASA_SCORE:
80.3778
COIL:
0.5358
CONS_SCORE:
0.597
DSS_SCORE:
0.1454
HELIX:
0.3669
FCONS_SCORE:
1.3657
RIG_SCORE:
0.8334
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K935E
TCGA-64-1679
LUAD
TCGA
LRKKLKGIN
DEG_APCC_DBOX_1
0.3056
p.K935E
DO26200
LUAD
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.3056
p.R927W
TCGA-D5-6928
COAD
TCGA
LRKKLKGIN
DEG_APCC_DBOX_1
0.8634
p.R927W
TCGA-DK-AA77
BLCA
TCGA
LRKKLKGIN
DEG_APCC_DBOX_1
0.8634
p.R927W
DO219014
BLCA
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.8634
p.R927W
DO7776
COAD
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.8634
p.G932S
TCGA-DA-A3F8
SKCM
TCGA
LRKKLKGIN
DEG_APCC_DBOX_1
0.5882
p.G932S
DO37418
SKCM
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.5882
p.A917V
TCGA-EE-A3JD
SKCM
TCGA
LRKKLKGIN
DEG_APCC_DBOX_1
0.0833
p.A917V
DO50299
SKCM
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.0833
p.M942I
TCGA-Z2-AA3V
SKCM
TCGA
LRKKLKGIN
DEG_APCC_DBOX_1
0.1111
p.M942I
DO220886
MELA
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.1111
p.M942I
DO51303
SKCM
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.1111
p.L930M
DO38404
STAD
ICGC
LRKKLKGIN
DEG_APCC_DBOX_1
0.711
p.E929G
SIDM00260
Gastric Carcinoma
GDSC
LRKKLKGIN
DEG_APCC_DBOX_1
0.7199
p.E929G
SIDM00248
Gastric Carcinoma
GDSC
LRKKLKGIN
DEG_APCC_DBOX_1
0.7199
p.E929G
MKN28
stomach
COSMIC
LRKKLKGIN
DEG_APCC_DBOX_1
0.7199
p.R940Q
SIDM00217
Colorectal Carcinoma
GDSC
LRKKLKGIN
DEG_APCC_DBOX_1
0.1667
p.R940Q
SNU-1040
large_intestine
COSMIC
LRKKLKGIN
DEG_APCC_DBOX_1
0.1667
p.D943N
SIDM01397
Melanoma
GDSC
LRKKLKGIN
DEG_APCC_DBOX_1
0.1944
p.S942C
ACH-001408
Bladder Cancer
CCLE
LRKKLKGIN
DEG_APCC_DBOX_1
0.1111
p.Y918H
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
LRKKLKGIN
DEG_APCC_DBOX_1
0.5556
Drug responses associated with TRANK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKKLKGIN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15050
TPR and ankyrin repeat-containing protein 1
DEG_APCC_DBOX_1
926:934
LRKKLKGIN
APC,CDC20,FZR1
0.7479
More...