DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKKLSQLQ
Uniprot ID:
Q9P2N5
Source protein:
RNA-binding protein 27
Source gene:
RBM27
Class:
DEG_APCC_DBOX_1
Location:
922:930
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8836
ASA_SCORE:
69.1556
COIL:
0.0308
CONS_SCORE:
0.3505
DSS_SCORE:
0.4202
HELIX:
0.9692
FCONS_SCORE:
1.0875
RIG_SCORE:
0.8048
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L926P
TCGA-25-2400
OV
TCGA
LRKKLSQLQ
DEG_APCC_DBOX_1
0.7582
p.L926P
DO28053
OV
ICGC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.7582
p.A934V
TCGA-A2-A25B
BRCA
TCGA
LRKKLSQLQ
DEG_APCC_DBOX_1
0.2222
p.A934V
DO2706
BRCA
ICGC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.2222
p.R923Q
DO233706
GACA
ICGC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.7329
p.G937C
DO228952
LICA
ICGC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.1389
p.L922V
DO228906
LICA
ICGC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.5654
p.E921D
DO222843
MELA
ICGC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.3056
p.K925Q
SIDM01611
Endometrial Carcinoma
GDSC
LRKKLSQLQ
DEG_APCC_DBOX_1
0.5833
p.K925Q
ACH-000996
Endometrial/Uterine Cancer
CCLE
LRKKLSQLQ
DEG_APCC_DBOX_1
0.5833
Drug responses associated with RBM27 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKKLSQLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2N5
RNA-binding protein 27
DEG_APCC_DBOX_1
922:930
LRKKLSQLQ
APC,CDC20,FZR1
0.8836
More...