DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKNLSELD
Uniprot ID:
Q4AC94
Source protein:
C2 domain-containing protein 3
Source gene:
C2CD3
Class:
DEG_APCC_DBOX_1
Location:
1886:1894
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9499
ASA_SCORE:
84.7556
COIL:
0.3071
CONS_SCORE:
0.5513
DSS_SCORE:
0.2679
HELIX:
0.694
FCONS_SCORE:
1.2809
RIG_SCORE:
0.7828
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1879H
TCGA-AG-A002
READ
TCGA
LRKNLSELD
DEG_APCC_DBOX_1
0.1389
p.T1880P
TCGA-DI-A1BU
UCEC
TCGA
LRKNLSELD
DEG_APCC_DBOX_1
0.1667
p.T1880P
DO42023
UCEC
ICGC
LRKNLSELD
DEG_APCC_DBOX_1
0.1667
p.T1880I
TCGA-ER-A19C
SKCM
TCGA
LRKNLSELD
DEG_APCC_DBOX_1
0.1667
p.T1880I
DO47353
SKCM
ICGC
LRKNLSELD
DEG_APCC_DBOX_1
0.1667
p.S1881C
TCGA-JY-A6FD
ESCA
TCGA
LRKNLSELD
DEG_APCC_DBOX_1
0.1944
p.K1888M
TCGA-XF-AAN3
BLCA
TCGA
LRKNLSELD
DEG_APCC_DBOX_1
0.6951
p.K1888M
DO219053
BLCA
ICGC
LRKNLSELD
DEG_APCC_DBOX_1
0.6951
p.T1880N
DO229031
LICA
ICGC
LRKNLSELD
DEG_APCC_DBOX_1
0.1667
p.Y1899C
ACH-000985
Colon/Colorectal Cancer
CCLE
LRKNLSELD
DEG_APCC_DBOX_1
0.1944
Drug responses associated with C2CD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKNLSELD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q4AC94
C2 domain-containing protein 3
DEG_APCC_DBOX_1
1886:1894
LRKNLSELD
APC,CDC20,FZR1
0.9499
More...