DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKQLGSVA
Uniprot ID:
Q9BSJ2
Source protein:
Gamma-tubulin complex component 2
Source gene:
TUBGCP2
Class:
DEG_APCC_DBOX_1
Location:
137:145
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9019
ASA_SCORE:
75.1889
COIL:
0.4184
CONS_SCORE:
0.3443
DSS_SCORE:
0.4123
HELIX:
0.5479
FCONS_SCORE:
1.0768
RIG_SCORE:
0.7298
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T146S
TCGA-37-5819
LUSC
TCGA
LRKQLGSVA
DEG_APCC_DBOX_1
0.3056
p.T146S
DO26479
LUSC
ICGC
LRKQLGSVA
DEG_APCC_DBOX_1
0.3056
p.M131I
TCGA-66-2756
LUSC
TCGA
LRKQLGSVA
DEG_APCC_DBOX_1
0.1667
p.M131I
DO27128
LUSC
ICGC
LRKQLGSVA
DEG_APCC_DBOX_1
0.1667
p.V144M
TCGA-G4-6304
COAD
TCGA
LRKQLGSVA
DEG_APCC_DBOX_1
0.6097
p.V144M
DO10639
COAD
ICGC
LRKQLGSVA
DEG_APCC_DBOX_1
0.6097
p.V144M
DO233913
GACA
ICGC
LRKQLGSVA
DEG_APCC_DBOX_1
0.6097
p.G142A
DO48385
BLCA
ICGC
LRKQLGSVA
DEG_APCC_DBOX_1
0.6429
p.Q152K
DO229032
LICA
ICGC
LRKQLGSVA
DEG_APCC_DBOX_1
0.1389
p.I129V
SIDM00863
Burkitt's Lymphoma
GDSC
LRKQLGSVA
DEG_APCC_DBOX_1
0.1111
p.I129V
ACH-000877
Lymphoma
CCLE
LRKQLGSVA
DEG_APCC_DBOX_1
0.1111
p.I129V
ACH-001064
Lymphoma
CCLE
LRKQLGSVA
DEG_APCC_DBOX_1
0.1111
p.I129V
EB2
haematopoietic_and_lymphoid_tissue
COSMIC
LRKQLGSVA
DEG_APCC_DBOX_1
0.1111
p.A128V
JEG-3
placenta
COSMIC
LRKQLGSVA
DEG_APCC_DBOX_1
0.1944
p.P142S
K2
skin
COSMIC
LRKQLGSVA
DEG_APCC_DBOX_1
0.6752
p.E131K
NCI-H2342
lung
COSMIC
LRKQLGSVA
DEG_APCC_DBOX_1
0.1667
Drug responses associated with TUBGCP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKQLGSVA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BSJ2
Gamma-tubulin complex component 2
DEG_APCC_DBOX_1
137:145
LRKQLGSVA
APC,CDC20,FZR1
0.9019
More...