DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKRLDQVE
Uniprot ID:
Q9UQE7
Source protein:
Structural maintenance of chromosomes protein 3
Source gene:
SMC3
Class:
DEG_APCC_DBOX_1
Location:
836:844
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.505
ASA_SCORE:
95.4111
COIL:
0.0339
CONS_SCORE:
0.4017
DSS_SCORE:
0.3091
HELIX:
0.9666
FCONS_SCORE:
1.2668
RIG_SCORE:
0.8384
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R827L
TCGA-FI-A2D5
UCEC
TCGA
LRKRLDQVE
DEG_APCC_DBOX_1
0.0833
p.R827L
DO41331
UCEC
ICGC
LRKRLDQVE
DEG_APCC_DBOX_1
0.0833
p.T830P
TCGA-FI-A2D5
UCEC
TCGA
LRKRLDQVE
DEG_APCC_DBOX_1
0.1667
p.T830P
DO41331
UCEC
ICGC
LRKRLDQVE
DEG_APCC_DBOX_1
0.1667
p.Q845H
DO228986
LICA
ICGC
LRKRLDQVE
DEG_APCC_DBOX_1
0.3056
p.R837K
DO232761
PBCA
ICGC
LRKRLDQVE
DEG_APCC_DBOX_1
0.7237
p.E834Q
SIDM00796
Head and Neck Carcinoma
GDSC
LRKRLDQVE
DEG_APCC_DBOX_1
0.2778
p.E834Q
ACH-000740
Head and Neck Cancer
CCLE
LRKRLDQVE
DEG_APCC_DBOX_1
0.2778
p.E834Q
A253
salivary_gland
COSMIC
LRKRLDQVE
DEG_APCC_DBOX_1
0.2778
Drug responses associated with SMC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKRLDQVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQE7
Structural maintenance of chromosomes protein 3
DEG_APCC_DBOX_1
836:844
LRKRLDQVE
APC,CDC20,FZR1
0.505
More...