DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKTPLKT
Uniprot ID:
P42695
Source protein:
Condensin-2 complex subunit D3
Source gene:
NCAPD3
Class:
DEG_SCF_FBW7_1
Location:
1489:1496
E3 ligase:
FBXW7
DEGRON score:
0.9507
ASA_SCORE:
127.6
COIL:
0.9598
CONS_SCORE:
0.2332
DSS_SCORE:
0.8611
HELIX:
0.0241
FCONS_SCORE:
0.9027
RIG_SCORE:
0.6975
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1490P
TCGA-44-A4SU
LUAD
TCGA
LRKTPLKT
DEG_SCF_FBW7_1
0.6401
p.R1490P
DO24507
LUAD
ICGC
LRKTPLKT
DEG_SCF_FBW7_1
0.6401
p.R1490Q
TCGA-AX-A06F
UCEC
TCGA
LRKTPLKT
DEG_SCF_FBW7_1
0.6218
p.R1490Q
DO41752
UCEC
ICGC
LRKTPLKT
DEG_SCF_FBW7_1
0.6218
p.R1490Q
SIDM00210
Ovarian Carcinoma
GDSC
LRKTPLKT
DEG_SCF_FBW7_1
0.6218
p.K1491T
TCGA-QG-A5Z2
COAD
TCGA
LRKTPLKT
DEG_SCF_FBW7_1
0.6195
p.K1491T
DO44096
COAD
ICGC
LRKTPLKT
DEG_SCF_FBW7_1
0.6195
p.L1494P
DO229259
THCA
ICGC
LRKTPLKT
DEG_SCF_FBW7_1
0.6471
p.K1479Q
SIDM00698
Small Cell Lung Carcinoma
GDSC
LRKTPLKT
DEG_SCF_FBW7_1
0.1667
p.K1479Q
ACH-000506
Lung Cancer
CCLE
LRKTPLKT
DEG_SCF_FBW7_1
0.1667
p.K1479Q
NCI-H146
lung
COSMIC
LRKTPLKT
DEG_SCF_FBW7_1
0.1667
p.K1491E
SIDM00122
Breast Carcinoma
GDSC
LRKTPLKT
DEG_SCF_FBW7_1
0.591
p.K1491E
ACH-000288
Breast Cancer
CCLE
LRKTPLKT
DEG_SCF_FBW7_1
0.591
p.K1491E
BT-549
breast
COSMIC
LRKTPLKT
DEG_SCF_FBW7_1
0.591
Drug responses associated with NCAPD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKTPLKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P42695
Condensin-2 complex subunit D3
DEG_SCF_FBW7_1
1489:1496
LRKTPLKT
FBXW7
0.9507
More...