DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLALLLLA
Uniprot ID:
P20155
Source protein:
Serine protease inhibitor Kazal-type 2
Source gene:
SPINK2
Class:
DEG_APCC_DBOX_1
Location:
6:14
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6555
ASA_SCORE:
63.7778
COIL:
0.2064
CONS_SCORE:
0.5623
DSS_SCORE:
0.0009
HELIX:
0.5936
FCONS_SCORE:
1.5926
RIG_SCORE:
0.9958
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L21M
TCGA-BH-A18G
BRCA
TCGA
LRLALLLLA
DEG_APCC_DBOX_1
0.1389
p.S20C
TCGA-P3-A6T4
HNSC
TCGA
LRLALLLLA
DEG_APCC_DBOX_1
0.1667
p.S23R
DO229009
LICA
ICGC
LRLALLLLA
DEG_APCC_DBOX_1
0.0833
p.T16S
DO50932
LICA
ICGC
LRLALLLLA
DEG_APCC_DBOX_1
0.2778
p.L11P
DO229259
THCA
ICGC
LRLALLLLA
DEG_APCC_DBOX_1
0.6471
Drug responses associated with SPINK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLALLLLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20155
Serine protease inhibitor Kazal-type 2
DEG_APCC_DBOX_1
6:14
LRLALLLLA
APC,CDC20,FZR1
0.6555
More...