DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLGLHGVL
Uniprot ID:
Q92611
Source protein:
ER degradation-enhancing alpha-mannosidase-like protein 1
Source gene:
EDEM1
Class:
DEG_APCC_DBOX_1
Location:
13:21
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6741
ASA_SCORE:
51.2889
COIL:
0.0328
CONS_SCORE:
0.2386
DSS_SCORE:
0.0001
HELIX:
0.9639
FCONS_SCORE:
1.3121
RIG_SCORE:
0.9444
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P29S
TCGA-A6-5661
COAD
TCGA
LRLGLHGVL
DEG_APCC_DBOX_1
0.1111
p.P29S
DO8634
COAD
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.1111
p.S4L
DO590
BLCA
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.0833
p.N3I
DO44832
LICA
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.0556
p.S19L
DO219468
SKCM
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.7667
p.D21N
DO47769
STAD
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.6932
p.G16V
DO229272
THCA
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.6421
p.L17P
DO229242
THCA
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.7582
p.D23Y
DO52412
UCEC
ICGC
LRLGLHGVL
DEG_APCC_DBOX_1
0.2778
p.W3C
SIDM01233
Colorectal Carcinoma
GDSC
LRLGLHGVL
DEG_APCC_DBOX_1
0.0556
p.V11A
SIDM00498
Colorectal Carcinoma
GDSC
LRLGLHGVL
DEG_APCC_DBOX_1
0.2778
p.V11A
ACH-000970
Colon/Colorectal Cancer
CCLE
LRLGLHGVL
DEG_APCC_DBOX_1
0.2778
Drug responses associated with EDEM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLGLHGVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92611
ER degradation-enhancing alpha-mannosidase-like protein 1
DEG_APCC_DBOX_1
13:21
LRLGLHGVL
APC,CDC20,FZR1
0.6741
More...