DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LRLHTE
Uniprot ID:
Q86WJ1
Source protein:
Chromodomain-helicase-DNA-binding protein 1-like
Source gene:
CHD1L
Class:
LIG_APCC_ABBA_1
Location:
18:23
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8501
ASA_SCORE:
105.8
COIL:
0.7787
CONS_SCORE:
0.2746
DSS_SCORE:
0.4513
HELIX:
0.1753
FCONS_SCORE:
0.8972
RIG_SCORE:
0.7907
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R25P
DO230334
COCA
ICGC
LRLHTE
LIG_APCC_ABBA_1
0.2778
p.R25P
DO229013
COCA
ICGC
LRLHTE
LIG_APCC_ABBA_1
0.2778
p.R25P
DO229005
COCA
ICGC
LRLHTE
LIG_APCC_ABBA_1
0.2778
p.A29T
DO233207
GACA
ICGC
LRLHTE
LIG_APCC_ABBA_1
0.1667
p.G24V
DO229275
THCA
ICGC
LRLHTE
LIG_APCC_ABBA_1
0.3056
p.E33K
SIDM00006
Other Solid Cancers
GDSC
LRLHTE
LIG_APCC_ABBA_1
0.0556
p.C25S
MDA-MB-157
breast
COSMIC
LRLHTE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with CHD1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLHTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86WJ1
Chromodomain-helicase-DNA-binding protein 1-like
LIG_APCC_ABBA_1
18:23
LRLHTE
APC,CDC20,FZR1
0.8501
More...