DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLKLPTLG
Uniprot ID:
Q9BXM0
Source protein:
Periaxin
Source gene:
PRX
Class:
DEG_APCC_DBOX_1
Location:
1243:1251
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.919
ASA_SCORE:
69.2
COIL:
0.6948
CONS_SCORE:
0.8624
DSS_SCORE:
0.4543
HELIX:
0.0344
FCONS_SCORE:
1.0085
RIG_SCORE:
0.7556
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1254P
TCGA-68-8251
LUSC
TCGA
LRLKLPTLG
DEG_APCC_DBOX_1
0.25
p.A1254P
DO26858
LUSC
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.25
p.A1252T
TCGA-AX-A062
UCEC
TCGA
LRLKLPTLG
DEG_APCC_DBOX_1
0.3056
p.A1252T
DO40906
UCEC
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.3056
p.A1252T
ACH-000985
Colon/Colorectal Cancer
CCLE
LRLKLPTLG
DEG_APCC_DBOX_1
0.3056
p.A1233V
TCGA-BR-A4QL
STAD
TCGA
LRLKLPTLG
DEG_APCC_DBOX_1
0.0556
p.A1233V
DO38723
STAD
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.0556
p.G1251W
TCGA-EE-A3AA
SKCM
TCGA
LRLKLPTLG
DEG_APCC_DBOX_1
0.6714
p.G1251W
DO37571
SKCM
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.6714
p.G1257V
TCGA-G9-6377
PRAD
TCGA
LRLKLPTLG
DEG_APCC_DBOX_1
0.1667
p.G1257V
DO36348
PRAD
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1667
p.A1237T
TCGA-SW-A7EA
STAD
TCGA
LRLKLPTLG
DEG_APCC_DBOX_1
0.1667
p.A1237T
DO51749
STAD
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1667
p.G1234D
DO222404
BTCA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.0833
p.E1235K
DO233183
GACA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1111
p.E1235K
SIDM00679
Cervical Carcinoma
GDSC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1111
p.E1235K
ACH-001525
Cervical Cancer
CCLE
LRLKLPTLG
DEG_APCC_DBOX_1
0.1111
p.E1235K
HT-3
cervix
COSMIC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1111
p.G1257E
DO233780
GACA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1667
p.L1250R
DO228187
LICA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.8428
p.A1252D
DO229015
LICA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.3056
p.A1233E
DO229025
LICA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.0556
p.A1254T
DO232761
PBCA
ICGC
LRLKLPTLG
DEG_APCC_DBOX_1
0.25
p.T1238A
SIDM01611
Endometrial Carcinoma
GDSC
LRLKLPTLG
DEG_APCC_DBOX_1
0.1944
Drug responses associated with PRX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLKLPTLG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BXM0
Periaxin
DEG_APCC_DBOX_1
1243:1251
LRLKLPTLG
APC,CDC20,FZR1
0.919
More...