DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRLMLIELK
Uniprot ID:
Q8WXH0
Source protein:
Nesprin-2
Source gene:
SYNE2
Class:
DEG_APCC_DBOX_1
Location:
2154:2162
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5613
ASA_SCORE:
70.2
COIL:
0.0066
CONS_SCORE:
0.484
DSS_SCORE:
0.1399
HELIX:
0.9932
FCONS_SCORE:
1.2724
RIG_SCORE:
0.8872
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2155K
TCGA-18-5595
LUSC
TCGA
LRLMLIELK
DEG_APCC_DBOX_1
0.7237
p.R2155K
DO27373
LUSC
ICGC
LRLMLIELK
DEG_APCC_DBOX_1
0.7237
p.R2155S
TCGA-18-5595
LUSC
TCGA
LRLMLIELK
DEG_APCC_DBOX_1
0.7427
p.R2155S
DO27373
LUSC
ICGC
LRLMLIELK
DEG_APCC_DBOX_1
0.7427
p.K2146R
TCGA-AX-A1CE
UCEC
TCGA
LRLMLIELK
DEG_APCC_DBOX_1
0.2222
p.K2146R
DO42280
UCEC
ICGC
LRLMLIELK
DEG_APCC_DBOX_1
0.2222
p.L2158F
TCGA-G4-6309
COAD
TCGA
LRLMLIELK
DEG_APCC_DBOX_1
0.6981
p.L2158F
DO7810
COAD
ICGC
LRLMLIELK
DEG_APCC_DBOX_1
0.6981
p.G2168C
DO229019
LICA
ICGC
LRLMLIELK
DEG_APCC_DBOX_1
0.1667
p.I2159M
DO229257
THCA
ICGC
LRLMLIELK
DEG_APCC_DBOX_1
0.6507
p.L2171V
SIDM00810
Non-Small Cell Lung Carcinoma
GDSC
LRLMLIELK
DEG_APCC_DBOX_1
0.0833
p.M2157T
SIDM00785
Acute Myeloid Leukemia
GDSC
LRLMLIELK
DEG_APCC_DBOX_1
0.6312
p.M2157T
KG-1
haematopoietic_and_lymphoid_tissue
COSMIC
LRLMLIELK
DEG_APCC_DBOX_1
0.6312
Drug responses associated with SYNE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLMLIELK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WXH0
Nesprin-2
DEG_APCC_DBOX_1
2154:2162
LRLMLIELK
APC,CDC20,FZR1
0.5613
More...