DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLRLMGVR
Uniprot ID:
Q9UBT6
Source protein:
DNA polymerase kappa
Source gene:
POLK
Class:
DEG_APCC_DBOX_1
Location:
504:512
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7331
ASA_SCORE:
28.1333
COIL:
0.2751
CONS_SCORE:
0.5521
DSS_SCORE:
0.227
HELIX:
0.0307
FCONS_SCORE:
1.7444
RIG_SCORE:
0.806
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R512W
TCGA-E6-A1LX
UCEC
TCGA
LRLRLMGVR
DEG_APCC_DBOX_1
0.7523
p.D510Y
DO37643
SKCM
ICGC
LRLRLMGVR
DEG_APCC_DBOX_1
0.7325
p.G510D
TCGA-CV-7421
HNSC
TCGA
LRLRLMGVR
DEG_APCC_DBOX_1
0.6087
p.G510S
TCGA-A3-3382
KIRC
TCGA
LRLRLMGVR
DEG_APCC_DBOX_1
0.5882
p.I513M
TCGA-QH-A86X
LGG
TCGA
LRLRLMGVR
DEG_APCC_DBOX_1
0.3056
p.P501L
DO229177
LMS
ICGC
LRLRLMGVR
DEG_APCC_DBOX_1
0.25
p.N518D
TCGA-F1-6177
STAD
TCGA
LRLRLMGVR
DEG_APCC_DBOX_1
0.1667
p.S498Y
DO48566
BLCA
ICGC
LRLRLMGVR
DEG_APCC_DBOX_1
0.1667
p.S498Y
DO41458
UCEC
ICGC
LRLRLMGVR
DEG_APCC_DBOX_1
0.1667
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Drug responses associated with POLK mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LRLRLMGVR
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBT6
DNA polymerase kappa
DEG_APCC_DBOX_1
504:512
LRLRLMGVR
APC,CDC20,FZR1
0.7331
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