DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLYAE
Uniprot ID:
Q15124
Source protein:
Phosphoglucomutase-like protein 5
Source gene:
PGM5
Class:
LIG_APCC_ABBA_1
Location:
519:524
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.937
ASA_SCORE:
38.0333
COIL:
0.1003
CONS_SCORE:
0.6693
DSS_SCORE:
0.3338
HELIX:
0.4788
FCONS_SCORE:
1.259
RIG_SCORE:
0.7914
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G532S
TCGA-06-0749
GBM
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.1111
p.G532S
DO12694
GBM
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1111
p.G532S
SIDM01664
Prostate Carcinoma
GDSC
LRLYAE
LIG_APCC_ABBA_1
0.1111
p.T518S
TCGA-58-A46M
LUSC
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.3056
p.T518S
DO45485
LUSC
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.3056
p.E527K
TCGA-B5-A3FC
UCEC
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.25
p.E527K
DO41871
UCEC
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.25
p.H533L
TCGA-BA-A6DA
HNSC
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.0833
p.H533L
DO44448
HNSC
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.0833
p.R516W
TCGA-BR-8680
STAD
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.25
p.R516W
TCGA-EI-6917
READ
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.25
p.R516W
DO36881
READ
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.25
p.R516W
DO47769
STAD
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.25
p.P530S
TCGA-EE-A3AA
SKCM
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.1667
p.P530S
DO222632
MELA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1667
p.P530S
DO37571
SKCM
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1667
p.A523T
TCGA-VR-A8EQ
ESCA
TCGA
LRLYAE
LIG_APCC_ABBA_1
0.6028
p.A523T
DO46591
OV
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.6028
p.G532C
DO228948
LICA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1111
p.G532C
DO229031
LICA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1111
p.D529Y
DO228952
LICA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1944
p.G514C
DO229019
LICA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1944
p.G514C
DO229034
LICA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.1944
p.S525N
DO222843
MELA
ICGC
LRLYAE
LIG_APCC_ABBA_1
0.75
p.S513R
SIDM00221
Melanoma
GDSC
LRLYAE
LIG_APCC_ABBA_1
0.6111
p.R520I
SIDM00760
Small Cell Lung Carcinoma
GDSC
LRLYAE
LIG_APCC_ABBA_1
0.6991
p.R520I
ACH-000729
Lung Cancer
CCLE
LRLYAE
LIG_APCC_ABBA_1
0.6991
p.R520I
NCI-H1963
lung
COSMIC
LRLYAE
LIG_APCC_ABBA_1
0.6991
p.S511Y
SIDM01739
Small Cell Lung Carcinoma
GDSC
LRLYAE
LIG_APCC_ABBA_1
0.5556
p.S511Y
ACH-000297
Lung Cancer
CCLE
LRLYAE
LIG_APCC_ABBA_1
0.5556
Drug responses associated with PGM5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLYAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15124
Phosphoglucomutase-like protein 5
LIG_APCC_ABBA_1
519:524
LRLYAE
APC,CDC20,FZR1
0.937
More...