DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRNDLLNII
Uniprot ID:
Q15554
Source protein:
Telomeric repeat-binding factor 2
Source gene:
TERF2
Class:
DEG_APCC_DBOX_1
Location:
233:241
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8851
ASA_SCORE:
53.7222
COIL:
0.0218
CONS_SCORE:
0.5718
DSS_SCORE:
0.3457
HELIX:
0.9751
FCONS_SCORE:
1.2774
RIG_SCORE:
0.8387
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K242T
TCGA-5M-AAT6
COAD
TCGA
LRNDLLNII
DEG_APCC_DBOX_1
0.3056
p.K242T
DO223703
COAD
ICGC
LRNDLLNII
DEG_APCC_DBOX_1
0.3056
p.E233K
TCGA-A5-A0G2
UCEC
TCGA
LRNDLLNII
DEG_APCC_DBOX_1
0.7022
p.E233K
DO41235
UCEC
ICGC
LRNDLLNII
DEG_APCC_DBOX_1
0.7022
p.R223H
TCGA-AX-A06F
UCEC
TCGA
LRNDLLNII
DEG_APCC_DBOX_1
0.0556
p.R223H
DO41752
UCEC
ICGC
LRNDLLNII
DEG_APCC_DBOX_1
0.0556
p.D231G
TCGA-CG-4442
STAD
TCGA
LRNDLLNII
DEG_APCC_DBOX_1
0.2778
p.D231G
DO38380
STAD
ICGC
LRNDLLNII
DEG_APCC_DBOX_1
0.2778
p.D231G
DO229245
THCA
ICGC
LRNDLLNII
DEG_APCC_DBOX_1
0.2778
p.H228Q
TCGA-IQ-A61I
HNSC
TCGA
LRNDLLNII
DEG_APCC_DBOX_1
0.1944
p.H228Q
DO49032
HNSC
ICGC
LRNDLLNII
DEG_APCC_DBOX_1
0.1944
p.I240S
SIDM00282
Colorectal Carcinoma
GDSC
LRNDLLNII
DEG_APCC_DBOX_1
0.7341
p.I240S
ACH-000998
Colon/Colorectal Cancer
CCLE
LRNDLLNII
DEG_APCC_DBOX_1
0.7341
p.I240S
CW-2
large_intestine
COSMIC
LRNDLLNII
DEG_APCC_DBOX_1
0.7341
Drug responses associated with TERF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRNDLLNII
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15554
Telomeric repeat-binding factor 2
DEG_APCC_DBOX_1
233:241
LRNDLLNII
APC,CDC20,FZR1
0.8851
More...