DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRPALVGVV
Uniprot ID:
Q9HAV7
Source protein:
GrpE protein homolog 1, mitochondrial
Source gene:
GRPEL1
Class:
DEG_APCC_DBOX_1
Location:
206:214
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.883
ASA_SCORE:
46.3556
COIL:
0.3304
CONS_SCORE:
0.7172
DSS_SCORE:
0.3939
HELIX:
0.0127
FCONS_SCORE:
1.3324
RIG_SCORE:
0.8278
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H202N
TCGA-05-4424
LUAD
TCGA
LRPALVGVV
DEG_APCC_DBOX_1
0.2222
p.H202N
DO23672
LUAD
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.2222
p.G203E
TCGA-A5-A0G2
UCEC
TCGA
LRPALVGVV
DEG_APCC_DBOX_1
0.25
p.G203E
DO41235
UCEC
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.25
p.R204C
TCGA-AA-3821
COAD
TCGA
LRPALVGVV
DEG_APCC_DBOX_1
0.2778
p.R204C
TCGA-AP-A0LM
UCEC
TCGA
LRPALVGVV
DEG_APCC_DBOX_1
0.2778
p.R204C
DO9314
COAD
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.2778
p.R204C
DO43306
UCEC
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.2778
p.G203V
TCGA-AP-A051
UCEC
TCGA
LRPALVGVV
DEG_APCC_DBOX_1
0.25
p.G203V
DO42673
UCEC
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.25
p.A209T
TCGA-IB-7651
PAAD
TCGA
LRPALVGVV
DEG_APCC_DBOX_1
0.6028
p.A209T
DO46657
PAAD
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.6028
p.R204H
DO52456
COCA
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.2778
p.P208T
DO228948
LICA
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.5919
p.G203W
DO229061
LICA
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.25
p.K215N
DO232761
PBCA
ICGC
LRPALVGVV
DEG_APCC_DBOX_1
0.3056
Drug responses associated with GRPEL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRPALVGVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HAV7
GrpE protein homolog 1, mitochondrial
DEG_APCC_DBOX_1
206:214
LRPALVGVV
APC,CDC20,FZR1
0.883
More...