DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRPFVD
Uniprot ID:
Q14807
Source protein:
Kinesin-like protein KIF22
Source gene:
KIF22
Class:
LIG_APCC_ABBA_1
Location:
50:55
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9531
ASA_SCORE:
59.0833
COIL:
0.716
CONS_SCORE:
0.6706
DSS_SCORE:
0.3687
HELIX:
0.123
FCONS_SCORE:
1.2132
RIG_SCORE:
0.7803
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P40L
TCGA-06-1805
GBM
TCGA
LRPFVD
LIG_APCC_ABBA_1
0.0556
p.P40L
DO11567
GBM
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.0556
p.A58V
TCGA-2W-A8YY
CESC
TCGA
LRPFVD
LIG_APCC_ABBA_1
0.25
p.A58V
TCGA-JY-A6FD
ESCA
TCGA
LRPFVD
LIG_APCC_ABBA_1
0.25
p.A58V
DO223732
CESC
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.25
p.R45M
TCGA-A5-A0G2
UCEC
TCGA
LRPFVD
LIG_APCC_ABBA_1
0.1944
p.R45M
DO41235
UCEC
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.1944
p.A60T
TCGA-AB-2828
LAML
TCGA
LRPFVD
LIG_APCC_ABBA_1
0.1944
p.A60T
DO21571
LAML
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.1944
p.R43H
DO225028
BRCA
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.1389
p.A47S
DO228985
LICA
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.25
p.Y58C
DO36839
READ
ICGC
LRPFVD
LIG_APCC_ABBA_1
0.25
p.R51W
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LRPFVD
LIG_APCC_ABBA_1
0.7523
p.R51W
ACH-002256
Leukemia
CCLE
LRPFVD
LIG_APCC_ABBA_1
0.7523
p.R51W
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LRPFVD
LIG_APCC_ABBA_1
0.7523
p.C65S
SIDM00085
Glioma
GDSC
LRPFVD
LIG_APCC_ABBA_1
0.0556
p.C65S
ACH-000655
Brain Cancer
CCLE
LRPFVD
LIG_APCC_ABBA_1
0.0556
p.C65S
SF268
central_nervous_system
COSMIC
LRPFVD
LIG_APCC_ABBA_1
0.0556
p.V46M
ACH-000122
Leukemia
CCLE
LRPFVD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with KIF22 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRPFVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14807
Kinesin-like protein KIF22
LIG_APCC_ABBA_1
50:55
LRPFVD
APC,CDC20,FZR1
0.9531
More...